Gene : Bradi1g25215 B. distachyon v3.1
Defline:  (1 of 1) PTHR10698 - V-TYPE PROTON ATPASE SUBUNIT H Genomic Order:  3175
Name:  ? Bradi1g25215 Secondary Identifier:  ? PAC:32797864
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g25215 0.5kb upstream 0.5kb upstream 5995 true Bd1: 20494329-20500323 Brachypodium distachyon
Bradi1g25215 0.5kb upstream 0.5kb upstream 500 false Bd1: 20499824-20500323 Brachypodium distachyon
Bradi1g25215 0.5kb downstream 0.5kb downstream 5995 true Bd1: 20493829-20499823 Brachypodium distachyon
Bradi1g25215 0.5kb downstream 0.5kb downstream 500 false Bd1: 20493829-20494328 Brachypodium distachyon
Bradi1g25215 1.0kb upstream 1.0kb upstream 6495 true Bd1: 20494329-20500823 Brachypodium distachyon
Bradi1g25215 1.0kb upstream 1.0kb upstream 1000 false Bd1: 20499824-20500823 Brachypodium distachyon
Bradi1g25215 1.0kb downstream 1.0kb downstream 6495 true Bd1: 20493329-20499823 Brachypodium distachyon
Bradi1g25215 1.0kb downstream 1.0kb downstream 1000 false Bd1: 20493329-20494328 Brachypodium distachyon
Bradi1g25215 2.0kb upstream 2.0kb upstream 7495 true Bd1: 20494329-20501823 Brachypodium distachyon
Bradi1g25215 2.0kb upstream 2.0kb upstream 2000 false Bd1: 20499824-20501823 Brachypodium distachyon
Bradi1g25215 2.0kb downstream 2.0kb downstream 7495 true Bd1: 20492329-20499823 Brachypodium distachyon
Bradi1g25215 2.0kb downstream 2.0kb downstream 2000 false Bd1: 20492329-20494328 Brachypodium distachyon
Bradi1g25215 5.0kb upstream 5.0kb upstream 10495 true Bd1: 20494329-20504823 Brachypodium distachyon
Bradi1g25215 5.0kb upstream 5.0kb upstream 5000 false Bd1: 20499824-20504823 Brachypodium distachyon
Bradi1g25215 5.0kb downstream 5.0kb downstream 10495 true Bd1: 20489329-20499823 Brachypodium distachyon
Bradi1g25215 5.0kb downstream 5.0kb downstream 5000 false Bd1: 20489329-20494328 Brachypodium distachyon
Bradi1g25215 10.0kb upstream 10.0kb upstream 15495 true Bd1: 20494329-20509823 Brachypodium distachyon
Bradi1g25215 10.0kb upstream 10.0kb upstream 10000 false Bd1: 20499824-20509823 Brachypodium distachyon
Bradi1g25215 10.0kb downstream 10.0kb downstream 15495 true Bd1: 20484329-20499823 Brachypodium distachyon
Bradi1g25215 10.0kb downstream 10.0kb downstream 10000 false Bd1: 20484329-20494328 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124587162 5269 Grass View MSA
122044648 5273 Angiosperm View MSA
121346588 5274 Embryophyte View MSA
123425769 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.728     High  
cufflinks 35.509     High  
cufflinks 38.598     High  
cufflinks 33.469     High  
cufflinks 30.245     High  
cufflinks 30.124     High  
cufflinks 31.469     High  
cufflinks 30.397     High  
cufflinks 29.802     High  
cufflinks 26.041     High  
cufflinks 28.598     High  
cufflinks 34.031     High  
cufflinks 27.026     High  
cufflinks 25.023     High  
cufflinks 32.801     High  
cufflinks 34.099     High  
cufflinks 28.686     High  
cufflinks 44.917     High High
cufflinks 38.065     High  
cufflinks 24.933     High  
cufflinks 34.336     High  
cufflinks 37.24     High  
cufflinks 31.011     High  
cufflinks 32.538     High  
cufflinks 26.613     High  
cufflinks 35.098     High  
cufflinks 25.896     High  
cufflinks 33.743     High  
cufflinks 33.882     High  
cufflinks 42.45     High High

0 Strain