Gene : Bradi1g25370 B. distachyon v3.1
Defline:  (1 of 63) PF03514 - GRAS domain family (GRAS) Genomic Order:  3194
Name:  ? Bradi1g25370 Secondary Identifier:  ? PAC:32792164
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g25370 0.5kb upstream 0.5kb upstream 5308 true Bd1: 20652782-20658089 Brachypodium distachyon
Bradi1g25370 0.5kb upstream 0.5kb upstream 500 false Bd1: 20657590-20658089 Brachypodium distachyon
Bradi1g25370 0.5kb downstream 0.5kb downstream 5308 true Bd1: 20652282-20657589 Brachypodium distachyon
Bradi1g25370 0.5kb downstream 0.5kb downstream 500 false Bd1: 20652282-20652781 Brachypodium distachyon
Bradi1g25370 1.0kb upstream 1.0kb upstream 5808 true Bd1: 20652782-20658589 Brachypodium distachyon
Bradi1g25370 1.0kb upstream 1.0kb upstream 1000 false Bd1: 20657590-20658589 Brachypodium distachyon
Bradi1g25370 1.0kb downstream 1.0kb downstream 5808 true Bd1: 20651782-20657589 Brachypodium distachyon
Bradi1g25370 1.0kb downstream 1.0kb downstream 1000 false Bd1: 20651782-20652781 Brachypodium distachyon
Bradi1g25370 2.0kb upstream 2.0kb upstream 6808 true Bd1: 20652782-20659589 Brachypodium distachyon
Bradi1g25370 2.0kb upstream 2.0kb upstream 2000 false Bd1: 20657590-20659589 Brachypodium distachyon
Bradi1g25370 2.0kb downstream 2.0kb downstream 6808 true Bd1: 20650782-20657589 Brachypodium distachyon
Bradi1g25370 2.0kb downstream 2.0kb downstream 2000 false Bd1: 20650782-20652781 Brachypodium distachyon
Bradi1g25370 5.0kb upstream 5.0kb upstream 9808 true Bd1: 20652782-20662589 Brachypodium distachyon
Bradi1g25370 5.0kb upstream 5.0kb upstream 5000 false Bd1: 20657590-20662589 Brachypodium distachyon
Bradi1g25370 5.0kb downstream 5.0kb downstream 9808 true Bd1: 20647782-20657589 Brachypodium distachyon
Bradi1g25370 5.0kb downstream 5.0kb downstream 5000 false Bd1: 20647782-20652781 Brachypodium distachyon
Bradi1g25370 10.0kb upstream 10.0kb upstream 14808 true Bd1: 20652782-20667589 Brachypodium distachyon
Bradi1g25370 10.0kb upstream 10.0kb upstream 10000 false Bd1: 20657590-20667589 Brachypodium distachyon
Bradi1g25370 10.0kb downstream 10.0kb downstream 14808 true Bd1: 20642782-20657589 Brachypodium distachyon
Bradi1g25370 10.0kb downstream 10.0kb downstream 10000 false Bd1: 20642782-20652781 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579695 5269 Grass View MSA
122048977 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.408        
cufflinks 3.001        
cufflinks 3.563        
cufflinks 2.352        
cufflinks 6.08       High
cufflinks 2.175        
cufflinks 2.769        
cufflinks 1.761       Low
cufflinks 1.601       Low
cufflinks 1.673       Low
cufflinks 8.317       High
cufflinks 11.856     High High
cufflinks 2.943        
cufflinks 3.224        
cufflinks 4.225        
cufflinks 3.051        
cufflinks 1.385       Low
cufflinks 4.968        
cufflinks 4.387        
cufflinks 11.096     High High
cufflinks 3.76        
cufflinks 2.468        
cufflinks 1.239       Low
cufflinks 1.516       Low
cufflinks 2.0        
cufflinks 3.112        
cufflinks 2.69        
cufflinks 3.13        
cufflinks 2.492        
cufflinks 7.278       High

0 Strain