Gene : Bradi1g25822 B. distachyon v3.1
Defline:  (1 of 1) KOG4595 - Uncharacterized conserved protein Genomic Order:  3240
Name:  ? Bradi1g25822 Secondary Identifier:  ? PAC:32797722
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g25822 0.5kb upstream 0.5kb upstream 2721 true Bd1: 20949076-20951796 Brachypodium distachyon
Bradi1g25822 0.5kb upstream 0.5kb upstream 500 false Bd1: 20951297-20951796 Brachypodium distachyon
Bradi1g25822 0.5kb downstream 0.5kb downstream 2721 true Bd1: 20948576-20951296 Brachypodium distachyon
Bradi1g25822 0.5kb downstream 0.5kb downstream 500 false Bd1: 20948576-20949075 Brachypodium distachyon
Bradi1g25822 1.0kb upstream 1.0kb upstream 3221 true Bd1: 20949076-20952296 Brachypodium distachyon
Bradi1g25822 1.0kb upstream 1.0kb upstream 1000 false Bd1: 20951297-20952296 Brachypodium distachyon
Bradi1g25822 1.0kb downstream 1.0kb downstream 3221 true Bd1: 20948076-20951296 Brachypodium distachyon
Bradi1g25822 1.0kb downstream 1.0kb downstream 1000 false Bd1: 20948076-20949075 Brachypodium distachyon
Bradi1g25822 2.0kb upstream 2.0kb upstream 4221 true Bd1: 20949076-20953296 Brachypodium distachyon
Bradi1g25822 2.0kb upstream 2.0kb upstream 2000 false Bd1: 20951297-20953296 Brachypodium distachyon
Bradi1g25822 2.0kb downstream 2.0kb downstream 4221 true Bd1: 20947076-20951296 Brachypodium distachyon
Bradi1g25822 2.0kb downstream 2.0kb downstream 2000 false Bd1: 20947076-20949075 Brachypodium distachyon
Bradi1g25822 5.0kb upstream 5.0kb upstream 7221 true Bd1: 20949076-20956296 Brachypodium distachyon
Bradi1g25822 5.0kb upstream 5.0kb upstream 5000 false Bd1: 20951297-20956296 Brachypodium distachyon
Bradi1g25822 5.0kb downstream 5.0kb downstream 7221 true Bd1: 20944076-20951296 Brachypodium distachyon
Bradi1g25822 5.0kb downstream 5.0kb downstream 5000 false Bd1: 20944076-20949075 Brachypodium distachyon
Bradi1g25822 10.0kb upstream 10.0kb upstream 12221 true Bd1: 20949076-20961296 Brachypodium distachyon
Bradi1g25822 10.0kb upstream 10.0kb upstream 10000 false Bd1: 20951297-20961296 Brachypodium distachyon
Bradi1g25822 10.0kb downstream 10.0kb downstream 12221 true Bd1: 20939076-20951296 Brachypodium distachyon
Bradi1g25822 10.0kb downstream 10.0kb downstream 10000 false Bd1: 20939076-20949075 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124590217 5269 Grass View MSA
122044441 5273 Angiosperm View MSA
121344709 5274 Embryophyte View MSA
123425132 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.707     High  
cufflinks 11.767     High  
cufflinks 12.115     High  
cufflinks 17.855     High  
cufflinks 12.52     High  
cufflinks 12.005     High  
cufflinks 11.309     High  
cufflinks 11.008     High  
cufflinks 12.242     High  
cufflinks 29.066     High High
cufflinks 19.685     High  
cufflinks 13.834     High  
cufflinks 15.037     High  
cufflinks 20.434     High  
cufflinks 22.552     High  
cufflinks 9.714     High Low
cufflinks 21.622     High  
cufflinks 8.45       Low
cufflinks 10.305       Low
cufflinks 22.338     High  
cufflinks 17.804     High  
cufflinks 12.425     High  
cufflinks 11.047     High  
cufflinks 12.24     High  
cufflinks 15.995     High  
cufflinks 27.486     High High
cufflinks 21.782     High  
cufflinks 19.222     High  
cufflinks 14.593     High  
cufflinks 15.486     High  

0 Strain