Gene : Bradi1g21050 B. distachyon v3.1
Defline:  (1 of 1) 2.7.6.3 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase / 7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase Genomic Order:  2631
Name:  ? Bradi1g21050 Secondary Identifier:  ? PAC:32800507
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-6147 Brachypodium distachyon pathologic  
Bdistachyon PWY-6612 Brachypodium distachyon pathologic  
Bdistachyon PWY-6614 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g21050 0.5kb upstream 0.5kb upstream 5072 true Bd1: 16959129-16964200 Brachypodium distachyon
Bradi1g21050 0.5kb upstream 0.5kb upstream 500 false Bd1: 16959129-16959628 Brachypodium distachyon
Bradi1g21050 0.5kb downstream 0.5kb downstream 5072 true Bd1: 16959629-16964700 Brachypodium distachyon
Bradi1g21050 0.5kb downstream 0.5kb downstream 500 false Bd1: 16964201-16964700 Brachypodium distachyon
Bradi1g21050 1.0kb upstream 1.0kb upstream 5572 true Bd1: 16958629-16964200 Brachypodium distachyon
Bradi1g21050 1.0kb upstream 1.0kb upstream 1000 false Bd1: 16958629-16959628 Brachypodium distachyon
Bradi1g21050 1.0kb downstream 1.0kb downstream 5572 true Bd1: 16959629-16965200 Brachypodium distachyon
Bradi1g21050 1.0kb downstream 1.0kb downstream 1000 false Bd1: 16964201-16965200 Brachypodium distachyon
Bradi1g21050 2.0kb upstream 2.0kb upstream 6572 true Bd1: 16957629-16964200 Brachypodium distachyon
Bradi1g21050 2.0kb upstream 2.0kb upstream 2000 false Bd1: 16957629-16959628 Brachypodium distachyon
Bradi1g21050 2.0kb downstream 2.0kb downstream 6572 true Bd1: 16959629-16966200 Brachypodium distachyon
Bradi1g21050 2.0kb downstream 2.0kb downstream 2000 false Bd1: 16964201-16966200 Brachypodium distachyon
Bradi1g21050 5.0kb upstream 5.0kb upstream 9572 true Bd1: 16954629-16964200 Brachypodium distachyon
Bradi1g21050 5.0kb upstream 5.0kb upstream 5000 false Bd1: 16954629-16959628 Brachypodium distachyon
Bradi1g21050 5.0kb downstream 5.0kb downstream 9572 true Bd1: 16959629-16969200 Brachypodium distachyon
Bradi1g21050 5.0kb downstream 5.0kb downstream 5000 false Bd1: 16964201-16969200 Brachypodium distachyon
Bradi1g21050 10.0kb upstream 10.0kb upstream 14572 true Bd1: 16949629-16964200 Brachypodium distachyon
Bradi1g21050 10.0kb upstream 10.0kb upstream 10000 false Bd1: 16949629-16959628 Brachypodium distachyon
Bradi1g21050 10.0kb downstream 10.0kb downstream 14572 true Bd1: 16959629-16974200 Brachypodium distachyon
Bradi1g21050 10.0kb downstream 10.0kb downstream 10000 false Bd1: 16964201-16974200 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573700 5269 Grass View MSA
122044899 5273 Angiosperm View MSA
121345768 5274 Embryophyte View MSA
123427891 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.294        
cufflinks 4.41        
cufflinks 3.897        
cufflinks 4.639       High
cufflinks 0.793       Low
cufflinks 3.478        
cufflinks 3.369        
cufflinks 2.731        
cufflinks 2.95        
cufflinks 2.704        
cufflinks 0.744       Low
cufflinks 2.946        
cufflinks 0.503       Low
cufflinks 0.772       Low
cufflinks 1.817        
cufflinks 3.756        
cufflinks 1.908        
cufflinks 5.375       High
cufflinks 1.107        
cufflinks 0.675       Low
cufflinks 2.722        
cufflinks 3.322        
cufflinks 2.185        
cufflinks 2.441        
cufflinks 3.44        
cufflinks 4.869       High
cufflinks 0.945       Low
cufflinks 2.871        
cufflinks 2.644        
cufflinks 5.118       High

0 Strain