Gene : Bradi1g21280 B. distachyon v3.1
Defline:  (1 of 1) PTHR18934//PTHR18934:SF81 - ATP-DEPENDENT RNA HELICASE // SUBFAMILY NOT NAMED Genomic Order:  2663
Name:  ? Bradi1g21280 Secondary Identifier:  ? PAC:32803832
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g21280 0.5kb upstream 0.5kb upstream 12739 true Bd1: 17111491-17124229 Brachypodium distachyon
Bradi1g21280 0.5kb upstream 0.5kb upstream 500 false Bd1: 17123730-17124229 Brachypodium distachyon
Bradi1g21280 0.5kb downstream 0.5kb downstream 12739 true Bd1: 17110991-17123729 Brachypodium distachyon
Bradi1g21280 0.5kb downstream 0.5kb downstream 500 false Bd1: 17110991-17111490 Brachypodium distachyon
Bradi1g21280 1.0kb upstream 1.0kb upstream 13239 true Bd1: 17111491-17124729 Brachypodium distachyon
Bradi1g21280 1.0kb upstream 1.0kb upstream 1000 false Bd1: 17123730-17124729 Brachypodium distachyon
Bradi1g21280 1.0kb downstream 1.0kb downstream 13239 true Bd1: 17110491-17123729 Brachypodium distachyon
Bradi1g21280 1.0kb downstream 1.0kb downstream 1000 false Bd1: 17110491-17111490 Brachypodium distachyon
Bradi1g21280 2.0kb upstream 2.0kb upstream 14239 true Bd1: 17111491-17125729 Brachypodium distachyon
Bradi1g21280 2.0kb upstream 2.0kb upstream 2000 false Bd1: 17123730-17125729 Brachypodium distachyon
Bradi1g21280 2.0kb downstream 2.0kb downstream 14239 true Bd1: 17109491-17123729 Brachypodium distachyon
Bradi1g21280 2.0kb downstream 2.0kb downstream 2000 false Bd1: 17109491-17111490 Brachypodium distachyon
Bradi1g21280 5.0kb upstream 5.0kb upstream 17239 true Bd1: 17111491-17128729 Brachypodium distachyon
Bradi1g21280 5.0kb upstream 5.0kb upstream 5000 false Bd1: 17123730-17128729 Brachypodium distachyon
Bradi1g21280 5.0kb downstream 5.0kb downstream 17239 true Bd1: 17106491-17123729 Brachypodium distachyon
Bradi1g21280 5.0kb downstream 5.0kb downstream 5000 false Bd1: 17106491-17111490 Brachypodium distachyon
Bradi1g21280 10.0kb upstream 10.0kb upstream 22239 true Bd1: 17111491-17133729 Brachypodium distachyon
Bradi1g21280 10.0kb upstream 10.0kb upstream 10000 false Bd1: 17123730-17133729 Brachypodium distachyon
Bradi1g21280 10.0kb downstream 10.0kb downstream 22239 true Bd1: 17101491-17123729 Brachypodium distachyon
Bradi1g21280 10.0kb downstream 10.0kb downstream 10000 false Bd1: 17101491-17111490 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582577 5269 Grass View MSA
122041869 5273 Angiosperm View MSA
121309896 5274 Embryophyte View MSA
123347530 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.887        
cufflinks 1.726        
cufflinks 0.896        
cufflinks 1.064        
cufflinks 0.151       Low
cufflinks 1.864       High
cufflinks 1.901       High
cufflinks 1.097        
cufflinks 1.71        
cufflinks 0.321        
cufflinks 1.126        
cufflinks 1.19        
cufflinks 0.738        
cufflinks 0.637        
cufflinks 0.258       Low
cufflinks 1.295        
cufflinks 0.267       Low
cufflinks 2.041       High
cufflinks 0.516        
cufflinks 0.074     Low Low
cufflinks 0.657        
cufflinks 0.938        
cufflinks 1.052        
cufflinks 1.468        
cufflinks 1.737        
cufflinks 0.646        
cufflinks 0.912        
cufflinks 0.657        
cufflinks 0.785        
cufflinks 1.374        

0 Strain