Gene : Bradi1g22010 B. distachyon v3.1
Defline:  (1 of 1) PTHR33417:SF1 - B12D PROTEIN Genomic Order:  2759
Name:  ? Bradi1g22010 Secondary Identifier:  ? PAC:32794908
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g22010 0.5kb upstream 0.5kb upstream 1200 true Bd1: 17709506-17710705 Brachypodium distachyon
Bradi1g22010 0.5kb upstream 0.5kb upstream 500 false Bd1: 17710206-17710705 Brachypodium distachyon
Bradi1g22010 0.5kb downstream 0.5kb downstream 1200 true Bd1: 17709006-17710205 Brachypodium distachyon
Bradi1g22010 0.5kb downstream 0.5kb downstream 500 false Bd1: 17709006-17709505 Brachypodium distachyon
Bradi1g22010 1.0kb upstream 1.0kb upstream 1700 true Bd1: 17709506-17711205 Brachypodium distachyon
Bradi1g22010 1.0kb upstream 1.0kb upstream 1000 false Bd1: 17710206-17711205 Brachypodium distachyon
Bradi1g22010 1.0kb downstream 1.0kb downstream 1700 true Bd1: 17708506-17710205 Brachypodium distachyon
Bradi1g22010 1.0kb downstream 1.0kb downstream 1000 false Bd1: 17708506-17709505 Brachypodium distachyon
Bradi1g22010 2.0kb upstream 2.0kb upstream 2700 true Bd1: 17709506-17712205 Brachypodium distachyon
Bradi1g22010 2.0kb upstream 2.0kb upstream 2000 false Bd1: 17710206-17712205 Brachypodium distachyon
Bradi1g22010 2.0kb downstream 2.0kb downstream 2700 true Bd1: 17707506-17710205 Brachypodium distachyon
Bradi1g22010 2.0kb downstream 2.0kb downstream 2000 false Bd1: 17707506-17709505 Brachypodium distachyon
Bradi1g22010 5.0kb upstream 5.0kb upstream 5700 true Bd1: 17709506-17715205 Brachypodium distachyon
Bradi1g22010 5.0kb upstream 5.0kb upstream 5000 false Bd1: 17710206-17715205 Brachypodium distachyon
Bradi1g22010 5.0kb downstream 5.0kb downstream 5700 true Bd1: 17704506-17710205 Brachypodium distachyon
Bradi1g22010 5.0kb downstream 5.0kb downstream 5000 false Bd1: 17704506-17709505 Brachypodium distachyon
Bradi1g22010 10.0kb upstream 10.0kb upstream 10700 true Bd1: 17709506-17720205 Brachypodium distachyon
Bradi1g22010 10.0kb upstream 10.0kb upstream 10000 false Bd1: 17710206-17720205 Brachypodium distachyon
Bradi1g22010 10.0kb downstream 10.0kb downstream 10700 true Bd1: 17699506-17710205 Brachypodium distachyon
Bradi1g22010 10.0kb downstream 10.0kb downstream 10000 false Bd1: 17699506-17709505 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582798 5269 Grass View MSA
122048114 5273 Angiosperm View MSA
121310851 5274 Embryophyte View MSA
123348236 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.045     Low  
cufflinks 0.037     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.035     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.047     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.208        
cufflinks 0.19     Low  
cufflinks 4.613       High
cufflinks 0.097     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.033     Low  
cufflinks 0.032     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.035     Low  

0 Strain