Gene : Bradi1g22101 B. distachyon v3.1
Defline:  (1 of 2) K18635 - protein SPIRAL1 and related proteins (SPR1) Genomic Order:  2771
Name:  ? Bradi1g22101 Secondary Identifier:  ? PAC:32803409
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g22101 0.5kb upstream 0.5kb upstream 4002 true Bd1: 17778857-17782858 Brachypodium distachyon
Bradi1g22101 0.5kb upstream 0.5kb upstream 500 false Bd1: 17782359-17782858 Brachypodium distachyon
Bradi1g22101 0.5kb downstream 0.5kb downstream 4002 true Bd1: 17778357-17782358 Brachypodium distachyon
Bradi1g22101 0.5kb downstream 0.5kb downstream 500 false Bd1: 17778357-17778856 Brachypodium distachyon
Bradi1g22101 1.0kb upstream 1.0kb upstream 4502 true Bd1: 17778857-17783358 Brachypodium distachyon
Bradi1g22101 1.0kb upstream 1.0kb upstream 1000 false Bd1: 17782359-17783358 Brachypodium distachyon
Bradi1g22101 1.0kb downstream 1.0kb downstream 4502 true Bd1: 17777857-17782358 Brachypodium distachyon
Bradi1g22101 1.0kb downstream 1.0kb downstream 1000 false Bd1: 17777857-17778856 Brachypodium distachyon
Bradi1g22101 2.0kb upstream 2.0kb upstream 5502 true Bd1: 17778857-17784358 Brachypodium distachyon
Bradi1g22101 2.0kb upstream 2.0kb upstream 2000 false Bd1: 17782359-17784358 Brachypodium distachyon
Bradi1g22101 2.0kb downstream 2.0kb downstream 5502 true Bd1: 17776857-17782358 Brachypodium distachyon
Bradi1g22101 2.0kb downstream 2.0kb downstream 2000 false Bd1: 17776857-17778856 Brachypodium distachyon
Bradi1g22101 5.0kb upstream 5.0kb upstream 8502 true Bd1: 17778857-17787358 Brachypodium distachyon
Bradi1g22101 5.0kb upstream 5.0kb upstream 5000 false Bd1: 17782359-17787358 Brachypodium distachyon
Bradi1g22101 5.0kb downstream 5.0kb downstream 8502 true Bd1: 17773857-17782358 Brachypodium distachyon
Bradi1g22101 5.0kb downstream 5.0kb downstream 5000 false Bd1: 17773857-17778856 Brachypodium distachyon
Bradi1g22101 10.0kb upstream 10.0kb upstream 13502 true Bd1: 17778857-17792358 Brachypodium distachyon
Bradi1g22101 10.0kb upstream 10.0kb upstream 10000 false Bd1: 17782359-17792358 Brachypodium distachyon
Bradi1g22101 10.0kb downstream 10.0kb downstream 13502 true Bd1: 17768857-17782358 Brachypodium distachyon
Bradi1g22101 10.0kb downstream 10.0kb downstream 10000 false Bd1: 17768857-17778856 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586243 5269 Grass View MSA
122045105 5273 Angiosperm View MSA
121351504 5274 Embryophyte View MSA
123425662 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 106.281     High  
cufflinks 58.899     High  
cufflinks 66.123     High  
cufflinks 65.618     High  
cufflinks 137.052     High High
cufflinks 65.829     High  
cufflinks 65.542     High  
cufflinks 82.505     High  
cufflinks 67.815     High  
cufflinks 83.444     High  
cufflinks 25.072     High Low
cufflinks 77.865     High  
cufflinks 38.581     High Low
cufflinks 21.045     High Low
cufflinks 109.498     High  
cufflinks 66.056     High  
cufflinks 105.326     High  
cufflinks 139.315     High High
cufflinks 69.002     High  
cufflinks 45.599     High  
cufflinks 179.156     High High
cufflinks 52.356     High  
cufflinks 65.604     High  
cufflinks 67.633     High  
cufflinks 63.518     High  
cufflinks 72.101     High  
cufflinks 23.118     High Low
cufflinks 67.682     High  
cufflinks 65.384     High  
cufflinks 156.059     High High

0 Strain