Gene : Bradi1g22811 B. distachyon v3.1
Genomic Order:  2854 Name:  ? Bradi1g22811
Secondary Identifier:  ? PAC:32800186
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g22811 0.5kb upstream 0.5kb upstream 2786 true Bd1: 18339263-18342048 Brachypodium distachyon
Bradi1g22811 0.5kb upstream 0.5kb upstream 500 false Bd1: 18339263-18339762 Brachypodium distachyon
Bradi1g22811 0.5kb downstream 0.5kb downstream 2786 true Bd1: 18339763-18342548 Brachypodium distachyon
Bradi1g22811 0.5kb downstream 0.5kb downstream 500 false Bd1: 18342049-18342548 Brachypodium distachyon
Bradi1g22811 1.0kb upstream 1.0kb upstream 3286 true Bd1: 18338763-18342048 Brachypodium distachyon
Bradi1g22811 1.0kb upstream 1.0kb upstream 1000 false Bd1: 18338763-18339762 Brachypodium distachyon
Bradi1g22811 1.0kb downstream 1.0kb downstream 3286 true Bd1: 18339763-18343048 Brachypodium distachyon
Bradi1g22811 1.0kb downstream 1.0kb downstream 1000 false Bd1: 18342049-18343048 Brachypodium distachyon
Bradi1g22811 2.0kb upstream 2.0kb upstream 4286 true Bd1: 18337763-18342048 Brachypodium distachyon
Bradi1g22811 2.0kb upstream 2.0kb upstream 2000 false Bd1: 18337763-18339762 Brachypodium distachyon
Bradi1g22811 2.0kb downstream 2.0kb downstream 4286 true Bd1: 18339763-18344048 Brachypodium distachyon
Bradi1g22811 2.0kb downstream 2.0kb downstream 2000 false Bd1: 18342049-18344048 Brachypodium distachyon
Bradi1g22811 5.0kb upstream 5.0kb upstream 7286 true Bd1: 18334763-18342048 Brachypodium distachyon
Bradi1g22811 5.0kb upstream 5.0kb upstream 5000 false Bd1: 18334763-18339762 Brachypodium distachyon
Bradi1g22811 5.0kb downstream 5.0kb downstream 7286 true Bd1: 18339763-18347048 Brachypodium distachyon
Bradi1g22811 5.0kb downstream 5.0kb downstream 5000 false Bd1: 18342049-18347048 Brachypodium distachyon
Bradi1g22811 10.0kb upstream 10.0kb upstream 12286 true Bd1: 18329763-18342048 Brachypodium distachyon
Bradi1g22811 10.0kb upstream 10.0kb upstream 10000 false Bd1: 18329763-18339762 Brachypodium distachyon
Bradi1g22811 10.0kb downstream 10.0kb downstream 12286 true Bd1: 18339763-18352048 Brachypodium distachyon
Bradi1g22811 10.0kb downstream 10.0kb downstream 10000 false Bd1: 18342049-18352048 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028150 5273 Angiosperm View MSA
124584177 5269 Grass View MSA
121344480 5274 Embryophyte View MSA
123428462 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.277        
cufflinks 0.634        
cufflinks 0.348        
cufflinks 0.651        
cufflinks 0.204        
cufflinks 0.402        
cufflinks 0.52        
cufflinks 0.207        
cufflinks 0.209        
cufflinks 0.444        
cufflinks 0.119        
cufflinks 0.233        
cufflinks 0.035     Low Low
cufflinks 0.054     Low Low
cufflinks 0.081       Low
cufflinks 0.283        
cufflinks 0.227        
cufflinks 1.413       High
cufflinks 0.146     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.64        
cufflinks 0.134        
cufflinks 0.196        
cufflinks 0.262        
cufflinks 0.339        
cufflinks 0.47        
cufflinks 0.153        
cufflinks 0.474        
cufflinks 0.362        
cufflinks 0.485        

0 Strain