Gene : Bradi1g23330 B. distachyon v3.1
Defline:  (1 of 5) KOG3399 - Predicted Yippee-type zinc-binding protein Genomic Order:  2922
Name:  ? Bradi1g23330 Secondary Identifier:  ? PAC:32804160
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g23330 0.5kb upstream 0.5kb upstream 4018 true Bd1: 18731515-18735532 Brachypodium distachyon
Bradi1g23330 0.5kb upstream 0.5kb upstream 500 false Bd1: 18735033-18735532 Brachypodium distachyon
Bradi1g23330 0.5kb downstream 0.5kb downstream 4018 true Bd1: 18731015-18735032 Brachypodium distachyon
Bradi1g23330 0.5kb downstream 0.5kb downstream 500 false Bd1: 18731015-18731514 Brachypodium distachyon
Bradi1g23330 1.0kb upstream 1.0kb upstream 4518 true Bd1: 18731515-18736032 Brachypodium distachyon
Bradi1g23330 1.0kb upstream 1.0kb upstream 1000 false Bd1: 18735033-18736032 Brachypodium distachyon
Bradi1g23330 1.0kb downstream 1.0kb downstream 4518 true Bd1: 18730515-18735032 Brachypodium distachyon
Bradi1g23330 1.0kb downstream 1.0kb downstream 1000 false Bd1: 18730515-18731514 Brachypodium distachyon
Bradi1g23330 2.0kb upstream 2.0kb upstream 5518 true Bd1: 18731515-18737032 Brachypodium distachyon
Bradi1g23330 2.0kb upstream 2.0kb upstream 2000 false Bd1: 18735033-18737032 Brachypodium distachyon
Bradi1g23330 2.0kb downstream 2.0kb downstream 5518 true Bd1: 18729515-18735032 Brachypodium distachyon
Bradi1g23330 2.0kb downstream 2.0kb downstream 2000 false Bd1: 18729515-18731514 Brachypodium distachyon
Bradi1g23330 5.0kb upstream 5.0kb upstream 8518 true Bd1: 18731515-18740032 Brachypodium distachyon
Bradi1g23330 5.0kb upstream 5.0kb upstream 5000 false Bd1: 18735033-18740032 Brachypodium distachyon
Bradi1g23330 5.0kb downstream 5.0kb downstream 8518 true Bd1: 18726515-18735032 Brachypodium distachyon
Bradi1g23330 5.0kb downstream 5.0kb downstream 5000 false Bd1: 18726515-18731514 Brachypodium distachyon
Bradi1g23330 10.0kb upstream 10.0kb upstream 13518 true Bd1: 18731515-18745032 Brachypodium distachyon
Bradi1g23330 10.0kb upstream 10.0kb upstream 10000 false Bd1: 18735033-18745032 Brachypodium distachyon
Bradi1g23330 10.0kb downstream 10.0kb downstream 13518 true Bd1: 18721515-18735032 Brachypodium distachyon
Bradi1g23330 10.0kb downstream 10.0kb downstream 10000 false Bd1: 18721515-18731514 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027710 5273 Angiosperm View MSA
124585828 5269 Grass View MSA
123428914 5275 Viridiplantae View MSA
121349627 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.508        
cufflinks 3.479        
cufflinks 3.69        
cufflinks 4.434        
cufflinks 3.352        
cufflinks 2.105        
cufflinks 2.279        
cufflinks 2.836        
cufflinks 2.573        
cufflinks 3.928        
cufflinks 0.909       Low
cufflinks 2.585        
cufflinks 1.718       Low
cufflinks 1.353       Low
cufflinks 5.131       High
cufflinks 2.487        
cufflinks 3.846        
cufflinks 4.138        
cufflinks 1.82        
cufflinks 1.093       Low
cufflinks 5.425       High
cufflinks 3.584        
cufflinks 2.785        
cufflinks 2.514        
cufflinks 2.663        
cufflinks 3.868        
cufflinks 1.166       Low
cufflinks 4.136        
cufflinks 3.962        
cufflinks 4.595        

0 Strain