Gene : Bradi1g28530 B. distachyon v3.1
Defline:  (1 of 1) PTHR22870:SF209 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 Genomic Order:  3590
Name:  ? Bradi1g28530 Secondary Identifier:  ? PAC:32800339
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g28530 0.5kb upstream 0.5kb upstream 9986 true Bd1: 23867710-23877695 Brachypodium distachyon
Bradi1g28530 0.5kb upstream 0.5kb upstream 500 false Bd1: 23877196-23877695 Brachypodium distachyon
Bradi1g28530 0.5kb downstream 0.5kb downstream 9986 true Bd1: 23867210-23877195 Brachypodium distachyon
Bradi1g28530 0.5kb downstream 0.5kb downstream 500 false Bd1: 23867210-23867709 Brachypodium distachyon
Bradi1g28530 1.0kb upstream 1.0kb upstream 10486 true Bd1: 23867710-23878195 Brachypodium distachyon
Bradi1g28530 1.0kb upstream 1.0kb upstream 1000 false Bd1: 23877196-23878195 Brachypodium distachyon
Bradi1g28530 1.0kb downstream 1.0kb downstream 10486 true Bd1: 23866710-23877195 Brachypodium distachyon
Bradi1g28530 1.0kb downstream 1.0kb downstream 1000 false Bd1: 23866710-23867709 Brachypodium distachyon
Bradi1g28530 2.0kb upstream 2.0kb upstream 11486 true Bd1: 23867710-23879195 Brachypodium distachyon
Bradi1g28530 2.0kb upstream 2.0kb upstream 2000 false Bd1: 23877196-23879195 Brachypodium distachyon
Bradi1g28530 2.0kb downstream 2.0kb downstream 11486 true Bd1: 23865710-23877195 Brachypodium distachyon
Bradi1g28530 2.0kb downstream 2.0kb downstream 2000 false Bd1: 23865710-23867709 Brachypodium distachyon
Bradi1g28530 5.0kb upstream 5.0kb upstream 14486 true Bd1: 23867710-23882195 Brachypodium distachyon
Bradi1g28530 5.0kb upstream 5.0kb upstream 5000 false Bd1: 23877196-23882195 Brachypodium distachyon
Bradi1g28530 5.0kb downstream 5.0kb downstream 14486 true Bd1: 23862710-23877195 Brachypodium distachyon
Bradi1g28530 5.0kb downstream 5.0kb downstream 5000 false Bd1: 23862710-23867709 Brachypodium distachyon
Bradi1g28530 10.0kb upstream 10.0kb upstream 19486 true Bd1: 23867710-23887195 Brachypodium distachyon
Bradi1g28530 10.0kb upstream 10.0kb upstream 10000 false Bd1: 23877196-23887195 Brachypodium distachyon
Bradi1g28530 10.0kb downstream 10.0kb downstream 19486 true Bd1: 23857710-23877195 Brachypodium distachyon
Bradi1g28530 10.0kb downstream 10.0kb downstream 10000 false Bd1: 23857710-23867709 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041443 5273 Angiosperm View MSA
124589794 5269 Grass View MSA
121345963 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.013        
cufflinks 2.115       Low
cufflinks 3.362        
cufflinks 1.528       Low
cufflinks 4.359        
cufflinks 4.483        
cufflinks 2.991        
cufflinks 5.126        
cufflinks 4.944        
cufflinks 8.21       High
cufflinks 14.519     High High
cufflinks 5.732        
cufflinks 10.442     High High
cufflinks 10.043     High High
cufflinks 6.273        
cufflinks 6.822        
cufflinks 4.054        
cufflinks 3.176        
cufflinks 2.778        
cufflinks 3.218        
cufflinks 2.82        
cufflinks 8.867       High
cufflinks 4.096        
cufflinks 4.673        
cufflinks 3.601        
cufflinks 3.433        
cufflinks 7.176        
cufflinks 4.352        
cufflinks 5.094        
cufflinks 1.888       Low

0 Strain