Gene : Bradi1g28847 B. distachyon v3.1
Defline:  (1 of 1) PTHR12654//PTHR12654:SF5 - BILE ACID BETA-GLUCOSIDASE-RELATED Genomic Order:  3636
Name:  ? Bradi1g28847 Secondary Identifier:  ? PAC:32803547
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g28847 0.5kb upstream 0.5kb upstream 10415 true Bd1: 24229489-24239903 Brachypodium distachyon
Bradi1g28847 0.5kb upstream 0.5kb upstream 500 false Bd1: 24229489-24229988 Brachypodium distachyon
Bradi1g28847 0.5kb downstream 0.5kb downstream 10415 true Bd1: 24229989-24240403 Brachypodium distachyon
Bradi1g28847 0.5kb downstream 0.5kb downstream 500 false Bd1: 24239904-24240403 Brachypodium distachyon
Bradi1g28847 1.0kb upstream 1.0kb upstream 10915 true Bd1: 24228989-24239903 Brachypodium distachyon
Bradi1g28847 1.0kb upstream 1.0kb upstream 1000 false Bd1: 24228989-24229988 Brachypodium distachyon
Bradi1g28847 1.0kb downstream 1.0kb downstream 10915 true Bd1: 24229989-24240903 Brachypodium distachyon
Bradi1g28847 1.0kb downstream 1.0kb downstream 1000 false Bd1: 24239904-24240903 Brachypodium distachyon
Bradi1g28847 2.0kb upstream 2.0kb upstream 11915 true Bd1: 24227989-24239903 Brachypodium distachyon
Bradi1g28847 2.0kb upstream 2.0kb upstream 2000 false Bd1: 24227989-24229988 Brachypodium distachyon
Bradi1g28847 2.0kb downstream 2.0kb downstream 11915 true Bd1: 24229989-24241903 Brachypodium distachyon
Bradi1g28847 2.0kb downstream 2.0kb downstream 2000 false Bd1: 24239904-24241903 Brachypodium distachyon
Bradi1g28847 5.0kb upstream 5.0kb upstream 14915 true Bd1: 24224989-24239903 Brachypodium distachyon
Bradi1g28847 5.0kb upstream 5.0kb upstream 5000 false Bd1: 24224989-24229988 Brachypodium distachyon
Bradi1g28847 5.0kb downstream 5.0kb downstream 14915 true Bd1: 24229989-24244903 Brachypodium distachyon
Bradi1g28847 5.0kb downstream 5.0kb downstream 5000 false Bd1: 24239904-24244903 Brachypodium distachyon
Bradi1g28847 10.0kb upstream 10.0kb upstream 19915 true Bd1: 24219989-24239903 Brachypodium distachyon
Bradi1g28847 10.0kb upstream 10.0kb upstream 10000 false Bd1: 24219989-24229988 Brachypodium distachyon
Bradi1g28847 10.0kb downstream 10.0kb downstream 19915 true Bd1: 24229989-24249903 Brachypodium distachyon
Bradi1g28847 10.0kb downstream 10.0kb downstream 10000 false Bd1: 24239904-24249903 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582367 5269 Grass View MSA
122045045 5273 Angiosperm View MSA
121351037 5274 Embryophyte View MSA
123425340 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.66        
cufflinks 5.146        
cufflinks 5.71        
cufflinks 4.335        
cufflinks 1.247       Low
cufflinks 4.579        
cufflinks 4.161        
cufflinks 3.754        
cufflinks 4.376        
cufflinks 3.95        
cufflinks 6.161       High
cufflinks 4.94        
cufflinks 6.612       High
cufflinks 4.589        
cufflinks 3.527        
cufflinks 4.963        
cufflinks 2.553        
cufflinks 7.587       High
cufflinks 2.654        
cufflinks 1.423       Low
cufflinks 2.326        
cufflinks 6.644       High
cufflinks 3.633        
cufflinks 3.741        
cufflinks 3.439        
cufflinks 5.283        
cufflinks 3.567        
cufflinks 5.3        
cufflinks 5.392        
cufflinks 3.523        

0 Strain