Gene : Bradi1g29510 B. distachyon v3.1
Defline:  (1 of 7) PF05623 - Protein of unknown function (DUF789) (DUF789) Genomic Order:  3737
Name:  ? Bradi1g29510 Secondary Identifier:  ? PAC:32801563
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g29510 0.5kb upstream 0.5kb upstream 7213 true Bd1: 25112994-25120206 Brachypodium distachyon
Bradi1g29510 0.5kb upstream 0.5kb upstream 500 false Bd1: 25112994-25113493 Brachypodium distachyon
Bradi1g29510 0.5kb downstream 0.5kb downstream 7213 true Bd1: 25113494-25120706 Brachypodium distachyon
Bradi1g29510 0.5kb downstream 0.5kb downstream 500 false Bd1: 25120207-25120706 Brachypodium distachyon
Bradi1g29510 1.0kb upstream 1.0kb upstream 7713 true Bd1: 25112494-25120206 Brachypodium distachyon
Bradi1g29510 1.0kb upstream 1.0kb upstream 1000 false Bd1: 25112494-25113493 Brachypodium distachyon
Bradi1g29510 1.0kb downstream 1.0kb downstream 7713 true Bd1: 25113494-25121206 Brachypodium distachyon
Bradi1g29510 1.0kb downstream 1.0kb downstream 1000 false Bd1: 25120207-25121206 Brachypodium distachyon
Bradi1g29510 2.0kb upstream 2.0kb upstream 8713 true Bd1: 25111494-25120206 Brachypodium distachyon
Bradi1g29510 2.0kb upstream 2.0kb upstream 2000 false Bd1: 25111494-25113493 Brachypodium distachyon
Bradi1g29510 2.0kb downstream 2.0kb downstream 8713 true Bd1: 25113494-25122206 Brachypodium distachyon
Bradi1g29510 2.0kb downstream 2.0kb downstream 2000 false Bd1: 25120207-25122206 Brachypodium distachyon
Bradi1g29510 5.0kb upstream 5.0kb upstream 11713 true Bd1: 25108494-25120206 Brachypodium distachyon
Bradi1g29510 5.0kb upstream 5.0kb upstream 5000 false Bd1: 25108494-25113493 Brachypodium distachyon
Bradi1g29510 5.0kb downstream 5.0kb downstream 11713 true Bd1: 25113494-25125206 Brachypodium distachyon
Bradi1g29510 5.0kb downstream 5.0kb downstream 5000 false Bd1: 25120207-25125206 Brachypodium distachyon
Bradi1g29510 10.0kb upstream 10.0kb upstream 16713 true Bd1: 25103494-25120206 Brachypodium distachyon
Bradi1g29510 10.0kb upstream 10.0kb upstream 10000 false Bd1: 25103494-25113493 Brachypodium distachyon
Bradi1g29510 10.0kb downstream 10.0kb downstream 16713 true Bd1: 25113494-25130206 Brachypodium distachyon
Bradi1g29510 10.0kb downstream 10.0kb downstream 10000 false Bd1: 25120207-25130206 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568509 5269 Grass View MSA
122049014 5273 Angiosperm View MSA
121311208 5274 Embryophyte View MSA
123348533 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.331       Low
cufflinks 0.98        
cufflinks 1.239        
cufflinks 0.699        
cufflinks 0.195       Low
cufflinks 0.928        
cufflinks 0.887        
cufflinks 0.76        
cufflinks 0.904        
cufflinks 0.635        
cufflinks 1.387       High
cufflinks 0.971        
cufflinks 1.197        
cufflinks 1.004        
cufflinks 0.648        
cufflinks 0.882        
cufflinks 0.443        
cufflinks 1.223        
cufflinks 0.553        
cufflinks 0.145     Low Low
cufflinks 0.898        
cufflinks 1.163        
cufflinks 0.73        
cufflinks 0.777        
cufflinks 0.668        
cufflinks 1.02        
cufflinks 1.331        
cufflinks 1.111        
cufflinks 1.068        
cufflinks 0.999        

0 Strain