Gene : Bradi1g29800 B. distachyon v3.1
Defline:  (1 of 1) PTHR11465//PTHR11465:SF20 - CATALASE // SUBFAMILY NOT NAMED Genomic Order:  3776
Name:  ? Bradi1g29800 Secondary Identifier:  ? PAC:32793173
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon DETOX1-PWY Brachypodium distachyon pathologic  
Bdistachyon DETOX1-PWY-1 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g29800 0.5kb upstream 0.5kb upstream 4373 true Bd1: 25333653-25338025 Brachypodium distachyon
Bradi1g29800 0.5kb upstream 0.5kb upstream 500 false Bd1: 25337526-25338025 Brachypodium distachyon
Bradi1g29800 0.5kb downstream 0.5kb downstream 4373 true Bd1: 25333153-25337525 Brachypodium distachyon
Bradi1g29800 0.5kb downstream 0.5kb downstream 500 false Bd1: 25333153-25333652 Brachypodium distachyon
Bradi1g29800 1.0kb upstream 1.0kb upstream 4873 true Bd1: 25333653-25338525 Brachypodium distachyon
Bradi1g29800 1.0kb upstream 1.0kb upstream 1000 false Bd1: 25337526-25338525 Brachypodium distachyon
Bradi1g29800 1.0kb downstream 1.0kb downstream 4873 true Bd1: 25332653-25337525 Brachypodium distachyon
Bradi1g29800 1.0kb downstream 1.0kb downstream 1000 false Bd1: 25332653-25333652 Brachypodium distachyon
Bradi1g29800 2.0kb upstream 2.0kb upstream 5873 true Bd1: 25333653-25339525 Brachypodium distachyon
Bradi1g29800 2.0kb upstream 2.0kb upstream 2000 false Bd1: 25337526-25339525 Brachypodium distachyon
Bradi1g29800 2.0kb downstream 2.0kb downstream 5873 true Bd1: 25331653-25337525 Brachypodium distachyon
Bradi1g29800 2.0kb downstream 2.0kb downstream 2000 false Bd1: 25331653-25333652 Brachypodium distachyon
Bradi1g29800 5.0kb upstream 5.0kb upstream 8873 true Bd1: 25333653-25342525 Brachypodium distachyon
Bradi1g29800 5.0kb upstream 5.0kb upstream 5000 false Bd1: 25337526-25342525 Brachypodium distachyon
Bradi1g29800 5.0kb downstream 5.0kb downstream 8873 true Bd1: 25328653-25337525 Brachypodium distachyon
Bradi1g29800 5.0kb downstream 5.0kb downstream 5000 false Bd1: 25328653-25333652 Brachypodium distachyon
Bradi1g29800 10.0kb upstream 10.0kb upstream 13873 true Bd1: 25333653-25347525 Brachypodium distachyon
Bradi1g29800 10.0kb upstream 10.0kb upstream 10000 false Bd1: 25337526-25347525 Brachypodium distachyon
Bradi1g29800 10.0kb downstream 10.0kb downstream 13873 true Bd1: 25323653-25337525 Brachypodium distachyon
Bradi1g29800 10.0kb downstream 10.0kb downstream 10000 false Bd1: 25323653-25333652 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040958 5273 Angiosperm View MSA
124575964 5269 Grass View MSA
121344781 5274 Embryophyte View MSA
123424047 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.563     High Low
cufflinks 68.439     High  
cufflinks 54.716     High  
cufflinks 38.798     High  
cufflinks 37.143     High  
cufflinks 38.927     High  
cufflinks 59.159     High  
cufflinks 17.523     High Low
cufflinks 23.39     High  
cufflinks 22.075     High Low
cufflinks 34.581     High  
cufflinks 39.716     High  
cufflinks 40.785     High  
cufflinks 24.053     High  
cufflinks 22.238     High Low
cufflinks 43.92     High  
cufflinks 28.749     High  
cufflinks 172.81     High High
cufflinks 97.328     High High
cufflinks 182.893     High High
cufflinks 82.391     High  
cufflinks 26.826     High  
cufflinks 18.37     High Low
cufflinks 23.039     High  
cufflinks 30.549     High  
cufflinks 47.109     High  
cufflinks 32.7     High  
cufflinks 42.675     High  
cufflinks 32.234     High  
cufflinks 73.941     High  

0 Strain