Gene : Bradi1g26287 B. distachyon v3.1
Defline:  (1 of 1) PTHR33307:SF2 - BNR/ASP-BOX REPEAT FAMILY PROTEIN Genomic Order:  3304
Name:  ? Bradi1g26287 Secondary Identifier:  ? PAC:32806188
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g26287 0.5kb upstream 0.5kb upstream 7457 true Bd1: 21360786-21368242 Brachypodium distachyon
Bradi1g26287 0.5kb upstream 0.5kb upstream 500 false Bd1: 21367743-21368242 Brachypodium distachyon
Bradi1g26287 0.5kb downstream 0.5kb downstream 7457 true Bd1: 21360286-21367742 Brachypodium distachyon
Bradi1g26287 0.5kb downstream 0.5kb downstream 500 false Bd1: 21360286-21360785 Brachypodium distachyon
Bradi1g26287 1.0kb upstream 1.0kb upstream 7957 true Bd1: 21360786-21368742 Brachypodium distachyon
Bradi1g26287 1.0kb upstream 1.0kb upstream 1000 false Bd1: 21367743-21368742 Brachypodium distachyon
Bradi1g26287 1.0kb downstream 1.0kb downstream 7957 true Bd1: 21359786-21367742 Brachypodium distachyon
Bradi1g26287 1.0kb downstream 1.0kb downstream 1000 false Bd1: 21359786-21360785 Brachypodium distachyon
Bradi1g26287 2.0kb upstream 2.0kb upstream 8957 true Bd1: 21360786-21369742 Brachypodium distachyon
Bradi1g26287 2.0kb upstream 2.0kb upstream 2000 false Bd1: 21367743-21369742 Brachypodium distachyon
Bradi1g26287 2.0kb downstream 2.0kb downstream 8957 true Bd1: 21358786-21367742 Brachypodium distachyon
Bradi1g26287 2.0kb downstream 2.0kb downstream 2000 false Bd1: 21358786-21360785 Brachypodium distachyon
Bradi1g26287 5.0kb upstream 5.0kb upstream 11957 true Bd1: 21360786-21372742 Brachypodium distachyon
Bradi1g26287 5.0kb upstream 5.0kb upstream 5000 false Bd1: 21367743-21372742 Brachypodium distachyon
Bradi1g26287 5.0kb downstream 5.0kb downstream 11957 true Bd1: 21355786-21367742 Brachypodium distachyon
Bradi1g26287 5.0kb downstream 5.0kb downstream 5000 false Bd1: 21355786-21360785 Brachypodium distachyon
Bradi1g26287 10.0kb upstream 10.0kb upstream 16957 true Bd1: 21360786-21377742 Brachypodium distachyon
Bradi1g26287 10.0kb upstream 10.0kb upstream 10000 false Bd1: 21367743-21377742 Brachypodium distachyon
Bradi1g26287 10.0kb downstream 10.0kb downstream 16957 true Bd1: 21350786-21367742 Brachypodium distachyon
Bradi1g26287 10.0kb downstream 10.0kb downstream 10000 false Bd1: 21350786-21360785 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124591075 5269 Grass View MSA
122044355 5273 Angiosperm View MSA
121343996 5274 Embryophyte View MSA
123425973 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.152        
cufflinks 2.907        
cufflinks 2.219        
cufflinks 2.7        
cufflinks 1.364        
cufflinks 4.303       High
cufflinks 3.086        
cufflinks 3.601        
cufflinks 5.178       High
cufflinks 2.293        
cufflinks 2.373        
cufflinks 3.477        
cufflinks 2.06        
cufflinks 2.038        
cufflinks 1.308        
cufflinks 3.445        
cufflinks 2.075        
cufflinks 7.307       High
cufflinks 1.17        
cufflinks 0.665       Low
cufflinks 2.235        
cufflinks 3.466        
cufflinks 3.395        
cufflinks 4.634       High
cufflinks 3.806        
cufflinks 2.065        
cufflinks 1.353        
cufflinks 1.877        
cufflinks 2.536        
cufflinks 2.535        

0 Strain