Gene : Bradi1g26330 B. distachyon v3.1
Defline:  (1 of 421) PF13041 - PPR repeat family (PPR_2) Genomic Order:  3308
Name:  ? Bradi1g26330 Secondary Identifier:  ? PAC:32798508
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g26330 0.5kb upstream 0.5kb upstream 4143 true Bd1: 21397890-21402032 Brachypodium distachyon
Bradi1g26330 0.5kb upstream 0.5kb upstream 500 false Bd1: 21401533-21402032 Brachypodium distachyon
Bradi1g26330 0.5kb downstream 0.5kb downstream 4143 true Bd1: 21397390-21401532 Brachypodium distachyon
Bradi1g26330 0.5kb downstream 0.5kb downstream 500 false Bd1: 21397390-21397889 Brachypodium distachyon
Bradi1g26330 1.0kb upstream 1.0kb upstream 4643 true Bd1: 21397890-21402532 Brachypodium distachyon
Bradi1g26330 1.0kb upstream 1.0kb upstream 1000 false Bd1: 21401533-21402532 Brachypodium distachyon
Bradi1g26330 1.0kb downstream 1.0kb downstream 4643 true Bd1: 21396890-21401532 Brachypodium distachyon
Bradi1g26330 1.0kb downstream 1.0kb downstream 1000 false Bd1: 21396890-21397889 Brachypodium distachyon
Bradi1g26330 2.0kb upstream 2.0kb upstream 5643 true Bd1: 21397890-21403532 Brachypodium distachyon
Bradi1g26330 2.0kb upstream 2.0kb upstream 2000 false Bd1: 21401533-21403532 Brachypodium distachyon
Bradi1g26330 2.0kb downstream 2.0kb downstream 5643 true Bd1: 21395890-21401532 Brachypodium distachyon
Bradi1g26330 2.0kb downstream 2.0kb downstream 2000 false Bd1: 21395890-21397889 Brachypodium distachyon
Bradi1g26330 5.0kb upstream 5.0kb upstream 8643 true Bd1: 21397890-21406532 Brachypodium distachyon
Bradi1g26330 5.0kb upstream 5.0kb upstream 5000 false Bd1: 21401533-21406532 Brachypodium distachyon
Bradi1g26330 5.0kb downstream 5.0kb downstream 8643 true Bd1: 21392890-21401532 Brachypodium distachyon
Bradi1g26330 5.0kb downstream 5.0kb downstream 5000 false Bd1: 21392890-21397889 Brachypodium distachyon
Bradi1g26330 10.0kb upstream 10.0kb upstream 13643 true Bd1: 21397890-21411532 Brachypodium distachyon
Bradi1g26330 10.0kb upstream 10.0kb upstream 10000 false Bd1: 21401533-21411532 Brachypodium distachyon
Bradi1g26330 10.0kb downstream 10.0kb downstream 13643 true Bd1: 21387890-21401532 Brachypodium distachyon
Bradi1g26330 10.0kb downstream 10.0kb downstream 10000 false Bd1: 21387890-21397889 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580607 5269 Grass View MSA
122045787 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121310503 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.377       Low
cufflinks 1.877       High
cufflinks 1.558        
cufflinks 1.633        
cufflinks 0.289       Low
cufflinks 1.099        
cufflinks 1.412        
cufflinks 0.78        
cufflinks 1.156        
cufflinks 0.756        
cufflinks 1.024        
cufflinks 1.385        
cufflinks 0.532        
cufflinks 0.716        
cufflinks 0.43        
cufflinks 1.279        
cufflinks 0.325       Low
cufflinks 1.115        
cufflinks 0.674        
cufflinks 0.097     Low Low
cufflinks 0.658        
cufflinks 0.983        
cufflinks 0.855        
cufflinks 0.871        
cufflinks 1.139        
cufflinks 1.2        
cufflinks 0.522        
cufflinks 1.228        
cufflinks 1.201        
cufflinks 1.141        

0 Strain