Gene : Bradi1g26710 B. distachyon v3.1
Defline:  (1 of 1) PTHR31580:SF5 - FILAMENT-LIKE PLANT PROTEIN 3 Genomic Order:  3356
Name:  ? Bradi1g26710 Secondary Identifier:  ? PAC:32805616
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g26710 0.5kb upstream 0.5kb upstream 6303 true Bd1: 21746806-21753108 Brachypodium distachyon
Bradi1g26710 0.5kb upstream 0.5kb upstream 500 false Bd1: 21752609-21753108 Brachypodium distachyon
Bradi1g26710 0.5kb downstream 0.5kb downstream 6303 true Bd1: 21746306-21752608 Brachypodium distachyon
Bradi1g26710 0.5kb downstream 0.5kb downstream 500 false Bd1: 21746306-21746805 Brachypodium distachyon
Bradi1g26710 1.0kb upstream 1.0kb upstream 6803 true Bd1: 21746806-21753608 Brachypodium distachyon
Bradi1g26710 1.0kb upstream 1.0kb upstream 1000 false Bd1: 21752609-21753608 Brachypodium distachyon
Bradi1g26710 1.0kb downstream 1.0kb downstream 6803 true Bd1: 21745806-21752608 Brachypodium distachyon
Bradi1g26710 1.0kb downstream 1.0kb downstream 1000 false Bd1: 21745806-21746805 Brachypodium distachyon
Bradi1g26710 2.0kb upstream 2.0kb upstream 7803 true Bd1: 21746806-21754608 Brachypodium distachyon
Bradi1g26710 2.0kb upstream 2.0kb upstream 2000 false Bd1: 21752609-21754608 Brachypodium distachyon
Bradi1g26710 2.0kb downstream 2.0kb downstream 7803 true Bd1: 21744806-21752608 Brachypodium distachyon
Bradi1g26710 2.0kb downstream 2.0kb downstream 2000 false Bd1: 21744806-21746805 Brachypodium distachyon
Bradi1g26710 5.0kb upstream 5.0kb upstream 10803 true Bd1: 21746806-21757608 Brachypodium distachyon
Bradi1g26710 5.0kb upstream 5.0kb upstream 5000 false Bd1: 21752609-21757608 Brachypodium distachyon
Bradi1g26710 5.0kb downstream 5.0kb downstream 10803 true Bd1: 21741806-21752608 Brachypodium distachyon
Bradi1g26710 5.0kb downstream 5.0kb downstream 5000 false Bd1: 21741806-21746805 Brachypodium distachyon
Bradi1g26710 10.0kb upstream 10.0kb upstream 15803 true Bd1: 21746806-21762608 Brachypodium distachyon
Bradi1g26710 10.0kb upstream 10.0kb upstream 10000 false Bd1: 21752609-21762608 Brachypodium distachyon
Bradi1g26710 10.0kb downstream 10.0kb downstream 15803 true Bd1: 21736806-21752608 Brachypodium distachyon
Bradi1g26710 10.0kb downstream 10.0kb downstream 10000 false Bd1: 21736806-21746805 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589908 5269 Grass View MSA
122043487 5273 Angiosperm View MSA
121310135 5274 Embryophyte View MSA
123347707 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.353        
cufflinks 2.772        
cufflinks 2.35        
cufflinks 2.932        
cufflinks 3.807        
cufflinks 3.213        
cufflinks 2.595        
cufflinks 4.603        
cufflinks 4.966        
cufflinks 6.874       High
cufflinks 5.232        
cufflinks 5.983       High
cufflinks 5.913       High
cufflinks 5.117        
cufflinks 6.905       High
cufflinks 2.644        
cufflinks 3.687        
cufflinks 1.635       Low
cufflinks 2.798        
cufflinks 0.874       Low
cufflinks 4.504        
cufflinks 8.396       High
cufflinks 4.114        
cufflinks 4.272        
cufflinks 3.342        
cufflinks 2.148        
cufflinks 4.963        
cufflinks 3.178        
cufflinks 5.543       High
cufflinks 3.106        

0 Strain