Gene : Bradi1g27130 B. distachyon v3.1
Defline:  (1 of 1) PTHR13789:SF224 - CTF2A LIKE OXIDOREDUCTASE-RELATED Genomic Order:  3415
Name:  ? Bradi1g27130 Secondary Identifier:  ? PAC:32800206
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g27130 0.5kb upstream 0.5kb upstream 2718 true Bd1: 22240272-22242989 Brachypodium distachyon
Bradi1g27130 0.5kb upstream 0.5kb upstream 500 false Bd1: 22240272-22240771 Brachypodium distachyon
Bradi1g27130 0.5kb downstream 0.5kb downstream 2718 true Bd1: 22240772-22243489 Brachypodium distachyon
Bradi1g27130 0.5kb downstream 0.5kb downstream 500 false Bd1: 22242990-22243489 Brachypodium distachyon
Bradi1g27130 1.0kb upstream 1.0kb upstream 3218 true Bd1: 22239772-22242989 Brachypodium distachyon
Bradi1g27130 1.0kb upstream 1.0kb upstream 1000 false Bd1: 22239772-22240771 Brachypodium distachyon
Bradi1g27130 1.0kb downstream 1.0kb downstream 3218 true Bd1: 22240772-22243989 Brachypodium distachyon
Bradi1g27130 1.0kb downstream 1.0kb downstream 1000 false Bd1: 22242990-22243989 Brachypodium distachyon
Bradi1g27130 2.0kb upstream 2.0kb upstream 4218 true Bd1: 22238772-22242989 Brachypodium distachyon
Bradi1g27130 2.0kb upstream 2.0kb upstream 2000 false Bd1: 22238772-22240771 Brachypodium distachyon
Bradi1g27130 2.0kb downstream 2.0kb downstream 4218 true Bd1: 22240772-22244989 Brachypodium distachyon
Bradi1g27130 2.0kb downstream 2.0kb downstream 2000 false Bd1: 22242990-22244989 Brachypodium distachyon
Bradi1g27130 5.0kb upstream 5.0kb upstream 7218 true Bd1: 22235772-22242989 Brachypodium distachyon
Bradi1g27130 5.0kb upstream 5.0kb upstream 5000 false Bd1: 22235772-22240771 Brachypodium distachyon
Bradi1g27130 5.0kb downstream 5.0kb downstream 7218 true Bd1: 22240772-22247989 Brachypodium distachyon
Bradi1g27130 5.0kb downstream 5.0kb downstream 5000 false Bd1: 22242990-22247989 Brachypodium distachyon
Bradi1g27130 10.0kb upstream 10.0kb upstream 12218 true Bd1: 22230772-22242989 Brachypodium distachyon
Bradi1g27130 10.0kb upstream 10.0kb upstream 10000 false Bd1: 22230772-22240771 Brachypodium distachyon
Bradi1g27130 10.0kb downstream 10.0kb downstream 12218 true Bd1: 22240772-22252989 Brachypodium distachyon
Bradi1g27130 10.0kb downstream 10.0kb downstream 10000 false Bd1: 22242990-22252989 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573034 5269 Grass View MSA
122047624 5273 Angiosperm View MSA
123429089 5275 Viridiplantae View MSA
121349985 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.675        
cufflinks 1.683        
cufflinks 1.693        
cufflinks 3.613        
cufflinks 1.664        
cufflinks 1.827        
cufflinks 1.576        
cufflinks 3.403        
cufflinks 2.138        
cufflinks 4.273        
cufflinks 2.63        
cufflinks 1.492        
cufflinks 3.305        
cufflinks 4.797        
cufflinks 6.371       High
cufflinks 1.712        
cufflinks 4.615        
cufflinks 0.087     Low Low
cufflinks 2.01        
cufflinks 3.067        
cufflinks 0.511       Low
cufflinks 2.021        
cufflinks 4.657        
cufflinks 2.762        
cufflinks 2.591        
cufflinks 2.343        
cufflinks 3.406        
cufflinks 3.891        
cufflinks 4.475        
cufflinks 0.57       Low

0 Strain