Gene : Bradi1g27080 B. distachyon v3.1
Defline:  (1 of 1) PTHR12459:SF7 - GB Genomic Order:  3408
Name:  ? Bradi1g27080 Secondary Identifier:  ? PAC:32804648
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g27080 0.5kb upstream 0.5kb upstream 5610 true Bd1: 22167234-22172843 Brachypodium distachyon
Bradi1g27080 0.5kb upstream 0.5kb upstream 500 false Bd1: 22167234-22167733 Brachypodium distachyon
Bradi1g27080 0.5kb downstream 0.5kb downstream 5610 true Bd1: 22167734-22173343 Brachypodium distachyon
Bradi1g27080 0.5kb downstream 0.5kb downstream 500 false Bd1: 22172844-22173343 Brachypodium distachyon
Bradi1g27080 1.0kb upstream 1.0kb upstream 6110 true Bd1: 22166734-22172843 Brachypodium distachyon
Bradi1g27080 1.0kb upstream 1.0kb upstream 1000 false Bd1: 22166734-22167733 Brachypodium distachyon
Bradi1g27080 1.0kb downstream 1.0kb downstream 6110 true Bd1: 22167734-22173843 Brachypodium distachyon
Bradi1g27080 1.0kb downstream 1.0kb downstream 1000 false Bd1: 22172844-22173843 Brachypodium distachyon
Bradi1g27080 2.0kb upstream 2.0kb upstream 7110 true Bd1: 22165734-22172843 Brachypodium distachyon
Bradi1g27080 2.0kb upstream 2.0kb upstream 2000 false Bd1: 22165734-22167733 Brachypodium distachyon
Bradi1g27080 2.0kb downstream 2.0kb downstream 7110 true Bd1: 22167734-22174843 Brachypodium distachyon
Bradi1g27080 2.0kb downstream 2.0kb downstream 2000 false Bd1: 22172844-22174843 Brachypodium distachyon
Bradi1g27080 5.0kb upstream 5.0kb upstream 10110 true Bd1: 22162734-22172843 Brachypodium distachyon
Bradi1g27080 5.0kb upstream 5.0kb upstream 5000 false Bd1: 22162734-22167733 Brachypodium distachyon
Bradi1g27080 5.0kb downstream 5.0kb downstream 10110 true Bd1: 22167734-22177843 Brachypodium distachyon
Bradi1g27080 5.0kb downstream 5.0kb downstream 5000 false Bd1: 22172844-22177843 Brachypodium distachyon
Bradi1g27080 10.0kb upstream 10.0kb upstream 15110 true Bd1: 22157734-22172843 Brachypodium distachyon
Bradi1g27080 10.0kb upstream 10.0kb upstream 10000 false Bd1: 22157734-22167733 Brachypodium distachyon
Bradi1g27080 10.0kb downstream 10.0kb downstream 15110 true Bd1: 22167734-22182843 Brachypodium distachyon
Bradi1g27080 10.0kb downstream 10.0kb downstream 10000 false Bd1: 22172844-22182843 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581497 5269 Grass View MSA
122047652 5273 Angiosperm View MSA
121343908 5274 Embryophyte View MSA
123425217 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.075        
cufflinks 7.673        
cufflinks 9.683        
cufflinks 7.195        
cufflinks 5.369       Low
cufflinks 7.408        
cufflinks 6.941        
cufflinks 7.168        
cufflinks 7.293        
cufflinks 9.453        
cufflinks 8.845     High  
cufflinks 7.198        
cufflinks 7.433     High  
cufflinks 7.406        
cufflinks 6.089        
cufflinks 7.586        
cufflinks 6.546        
cufflinks 12.183     High High
cufflinks 15.181     High High
cufflinks 10.092        
cufflinks 10.299        
cufflinks 10.87     High High
cufflinks 7.243        
cufflinks 6.865        
cufflinks 6.896        
cufflinks 10.535        
cufflinks 10.203     High  
cufflinks 10.537        
cufflinks 9.737        
cufflinks 8.052        

0 Strain