Gene : Bradi1g27377 B. distachyon v3.1
Defline:  (1 of 1) PTHR11361:SF21 - MUTS PROTEIN HOMOLOG 4 Genomic Order:  3447
Name:  ? Bradi1g27377 Secondary Identifier:  ? PAC:32795057
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g27377 0.5kb upstream 0.5kb upstream 13848 true Bd1: 22454802-22468649 Brachypodium distachyon
Bradi1g27377 0.5kb upstream 0.5kb upstream 500 false Bd1: 22468150-22468649 Brachypodium distachyon
Bradi1g27377 0.5kb downstream 0.5kb downstream 13848 true Bd1: 22454302-22468149 Brachypodium distachyon
Bradi1g27377 0.5kb downstream 0.5kb downstream 500 false Bd1: 22454302-22454801 Brachypodium distachyon
Bradi1g27377 1.0kb upstream 1.0kb upstream 14348 true Bd1: 22454802-22469149 Brachypodium distachyon
Bradi1g27377 1.0kb upstream 1.0kb upstream 1000 false Bd1: 22468150-22469149 Brachypodium distachyon
Bradi1g27377 1.0kb downstream 1.0kb downstream 14348 true Bd1: 22453802-22468149 Brachypodium distachyon
Bradi1g27377 1.0kb downstream 1.0kb downstream 1000 false Bd1: 22453802-22454801 Brachypodium distachyon
Bradi1g27377 2.0kb upstream 2.0kb upstream 15348 true Bd1: 22454802-22470149 Brachypodium distachyon
Bradi1g27377 2.0kb upstream 2.0kb upstream 2000 false Bd1: 22468150-22470149 Brachypodium distachyon
Bradi1g27377 2.0kb downstream 2.0kb downstream 15348 true Bd1: 22452802-22468149 Brachypodium distachyon
Bradi1g27377 2.0kb downstream 2.0kb downstream 2000 false Bd1: 22452802-22454801 Brachypodium distachyon
Bradi1g27377 5.0kb upstream 5.0kb upstream 18348 true Bd1: 22454802-22473149 Brachypodium distachyon
Bradi1g27377 5.0kb upstream 5.0kb upstream 5000 false Bd1: 22468150-22473149 Brachypodium distachyon
Bradi1g27377 5.0kb downstream 5.0kb downstream 18348 true Bd1: 22449802-22468149 Brachypodium distachyon
Bradi1g27377 5.0kb downstream 5.0kb downstream 5000 false Bd1: 22449802-22454801 Brachypodium distachyon
Bradi1g27377 10.0kb upstream 10.0kb upstream 23348 true Bd1: 22454802-22478149 Brachypodium distachyon
Bradi1g27377 10.0kb upstream 10.0kb upstream 10000 false Bd1: 22468150-22478149 Brachypodium distachyon
Bradi1g27377 10.0kb downstream 10.0kb downstream 23348 true Bd1: 22444802-22468149 Brachypodium distachyon
Bradi1g27377 10.0kb downstream 10.0kb downstream 10000 false Bd1: 22444802-22454801 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581975 5269 Grass View MSA
122042795 5273 Angiosperm View MSA
121346371 5274 Embryophyte View MSA
123424062 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.347        
cufflinks 0.348        
cufflinks 0.35        
cufflinks 0.297        
cufflinks 0.171       Low
cufflinks 0.39        
cufflinks 0.293        
cufflinks 0.555        
cufflinks 0.493        
cufflinks 0.385        
cufflinks 0.843       High
cufflinks 0.394        
cufflinks 0.735       High
cufflinks 0.745       High
cufflinks 0.423        
cufflinks 0.393        
cufflinks 0.266        
cufflinks 0.183        
cufflinks 0.193     Low  
cufflinks 0.04     Low Low
cufflinks 0.182        
cufflinks 0.603        
cufflinks 0.579        
cufflinks 0.452        
cufflinks 0.348        
cufflinks 0.341        
cufflinks 0.893       High
cufflinks 0.432        
cufflinks 0.473        
cufflinks 0.16       Low

0 Strain