Gene : Bradi1g27470 B. distachyon v3.1
Defline:  (1 of 1) PTHR10788//PTHR10788:SF40 - TREHALOSE-6-PHOSPHATE SYNTHASE // SUBFAMILY NOT NAMED Genomic Order:  3460
Name:  ? Bradi1g27470 Secondary Identifier:  ? PAC:32793151
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g27470 0.5kb upstream 0.5kb upstream 5644 true Bd1: 22586832-22592475 Brachypodium distachyon
Bradi1g27470 0.5kb upstream 0.5kb upstream 500 false Bd1: 22591976-22592475 Brachypodium distachyon
Bradi1g27470 0.5kb downstream 0.5kb downstream 5644 true Bd1: 22586332-22591975 Brachypodium distachyon
Bradi1g27470 0.5kb downstream 0.5kb downstream 500 false Bd1: 22586332-22586831 Brachypodium distachyon
Bradi1g27470 1.0kb upstream 1.0kb upstream 6144 true Bd1: 22586832-22592975 Brachypodium distachyon
Bradi1g27470 1.0kb upstream 1.0kb upstream 1000 false Bd1: 22591976-22592975 Brachypodium distachyon
Bradi1g27470 1.0kb downstream 1.0kb downstream 6144 true Bd1: 22585832-22591975 Brachypodium distachyon
Bradi1g27470 1.0kb downstream 1.0kb downstream 1000 false Bd1: 22585832-22586831 Brachypodium distachyon
Bradi1g27470 2.0kb upstream 2.0kb upstream 7144 true Bd1: 22586832-22593975 Brachypodium distachyon
Bradi1g27470 2.0kb upstream 2.0kb upstream 2000 false Bd1: 22591976-22593975 Brachypodium distachyon
Bradi1g27470 2.0kb downstream 2.0kb downstream 7144 true Bd1: 22584832-22591975 Brachypodium distachyon
Bradi1g27470 2.0kb downstream 2.0kb downstream 2000 false Bd1: 22584832-22586831 Brachypodium distachyon
Bradi1g27470 5.0kb upstream 5.0kb upstream 10144 true Bd1: 22586832-22596975 Brachypodium distachyon
Bradi1g27470 5.0kb upstream 5.0kb upstream 5000 false Bd1: 22591976-22596975 Brachypodium distachyon
Bradi1g27470 5.0kb downstream 5.0kb downstream 10144 true Bd1: 22581832-22591975 Brachypodium distachyon
Bradi1g27470 5.0kb downstream 5.0kb downstream 5000 false Bd1: 22581832-22586831 Brachypodium distachyon
Bradi1g27470 10.0kb upstream 10.0kb upstream 15144 true Bd1: 22586832-22601975 Brachypodium distachyon
Bradi1g27470 10.0kb upstream 10.0kb upstream 10000 false Bd1: 22591976-22601975 Brachypodium distachyon
Bradi1g27470 10.0kb downstream 10.0kb downstream 15144 true Bd1: 22576832-22591975 Brachypodium distachyon
Bradi1g27470 10.0kb downstream 10.0kb downstream 10000 false Bd1: 22576832-22586831 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571815 5269 Grass View MSA
122044363 5273 Angiosperm View MSA
121351669 5274 Embryophyte View MSA
123427869 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.034     Low  
cufflinks 0.028     Low  
cufflinks 0.048     Low  
cufflinks 0.032     Low  
cufflinks 0.048     Low  
cufflinks 0.033     Low  
cufflinks 0.031     Low  
cufflinks 0.043     Low  
cufflinks 0.038     Low  
cufflinks 0.076     Low  
cufflinks 0.006     Low Low
cufflinks 0.054     Low  
cufflinks 0.015     Low  
cufflinks 0.001     Low Low
cufflinks 0.098       High
cufflinks 0.037     Low  
cufflinks 0.069     Low  
cufflinks 0.056     Low  
cufflinks 0.02     Low  
cufflinks 0.005     Low Low
cufflinks 0.002     Low Low
cufflinks 0.036     Low  
cufflinks 0.028     Low  
cufflinks 0.034     Low  
cufflinks 0.037     Low  
cufflinks 0.05     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.028     Low  
cufflinks 0.056     Low  
cufflinks 0.064     Low  

0 Strain