Gene : Bradi1g27841 B. distachyon v3.1
Defline:  (1 of 19) PF04195 - Putative gypsy type transposon (Transposase_28) Genomic Order:  3492
Name:  ? Bradi1g27841 Secondary Identifier:  ? PAC:32804045
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g27841 0.5kb upstream 0.5kb upstream 3118 true Bd1: 22990965-22994082 Brachypodium distachyon
Bradi1g27841 0.5kb upstream 0.5kb upstream 500 false Bd1: 22993583-22994082 Brachypodium distachyon
Bradi1g27841 0.5kb downstream 0.5kb downstream 3118 true Bd1: 22990465-22993582 Brachypodium distachyon
Bradi1g27841 0.5kb downstream 0.5kb downstream 500 false Bd1: 22990465-22990964 Brachypodium distachyon
Bradi1g27841 1.0kb upstream 1.0kb upstream 3618 true Bd1: 22990965-22994582 Brachypodium distachyon
Bradi1g27841 1.0kb upstream 1.0kb upstream 1000 false Bd1: 22993583-22994582 Brachypodium distachyon
Bradi1g27841 1.0kb downstream 1.0kb downstream 3618 true Bd1: 22989965-22993582 Brachypodium distachyon
Bradi1g27841 1.0kb downstream 1.0kb downstream 1000 false Bd1: 22989965-22990964 Brachypodium distachyon
Bradi1g27841 2.0kb upstream 2.0kb upstream 4618 true Bd1: 22990965-22995582 Brachypodium distachyon
Bradi1g27841 2.0kb upstream 2.0kb upstream 2000 false Bd1: 22993583-22995582 Brachypodium distachyon
Bradi1g27841 2.0kb downstream 2.0kb downstream 4618 true Bd1: 22988965-22993582 Brachypodium distachyon
Bradi1g27841 2.0kb downstream 2.0kb downstream 2000 false Bd1: 22988965-22990964 Brachypodium distachyon
Bradi1g27841 5.0kb upstream 5.0kb upstream 7618 true Bd1: 22990965-22998582 Brachypodium distachyon
Bradi1g27841 5.0kb upstream 5.0kb upstream 5000 false Bd1: 22993583-22998582 Brachypodium distachyon
Bradi1g27841 5.0kb downstream 5.0kb downstream 7618 true Bd1: 22985965-22993582 Brachypodium distachyon
Bradi1g27841 5.0kb downstream 5.0kb downstream 5000 false Bd1: 22985965-22990964 Brachypodium distachyon
Bradi1g27841 10.0kb upstream 10.0kb upstream 12618 true Bd1: 22990965-23003582 Brachypodium distachyon
Bradi1g27841 10.0kb upstream 10.0kb upstream 10000 false Bd1: 22993583-23003582 Brachypodium distachyon
Bradi1g27841 10.0kb downstream 10.0kb downstream 12618 true Bd1: 22980965-22993582 Brachypodium distachyon
Bradi1g27841 10.0kb downstream 10.0kb downstream 10000 false Bd1: 22980965-22990964 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121996241 5273 Angiosperm View MSA
124591012 5269 Grass View MSA
121266409 5274 Embryophyte View MSA
123304751 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain