Gene : Bradi1g28100 B. distachyon v3.1
Defline:  (1 of 2) K03022 - DNA-directed RNA polymerase III subunit RPC8 (RPC8, POLR3H) Genomic Order:  3529
Name:  ? Bradi1g28100 Secondary Identifier:  ? PAC:32797487
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g28100 0.5kb upstream 0.5kb upstream 7761 true Bd1: 23242651-23250411 Brachypodium distachyon
Bradi1g28100 0.5kb upstream 0.5kb upstream 500 false Bd1: 23249912-23250411 Brachypodium distachyon
Bradi1g28100 0.5kb downstream 0.5kb downstream 7761 true Bd1: 23242151-23249911 Brachypodium distachyon
Bradi1g28100 0.5kb downstream 0.5kb downstream 500 false Bd1: 23242151-23242650 Brachypodium distachyon
Bradi1g28100 1.0kb upstream 1.0kb upstream 8261 true Bd1: 23242651-23250911 Brachypodium distachyon
Bradi1g28100 1.0kb upstream 1.0kb upstream 1000 false Bd1: 23249912-23250911 Brachypodium distachyon
Bradi1g28100 1.0kb downstream 1.0kb downstream 8261 true Bd1: 23241651-23249911 Brachypodium distachyon
Bradi1g28100 1.0kb downstream 1.0kb downstream 1000 false Bd1: 23241651-23242650 Brachypodium distachyon
Bradi1g28100 2.0kb upstream 2.0kb upstream 9261 true Bd1: 23242651-23251911 Brachypodium distachyon
Bradi1g28100 2.0kb upstream 2.0kb upstream 2000 false Bd1: 23249912-23251911 Brachypodium distachyon
Bradi1g28100 2.0kb downstream 2.0kb downstream 9261 true Bd1: 23240651-23249911 Brachypodium distachyon
Bradi1g28100 2.0kb downstream 2.0kb downstream 2000 false Bd1: 23240651-23242650 Brachypodium distachyon
Bradi1g28100 5.0kb upstream 5.0kb upstream 12261 true Bd1: 23242651-23254911 Brachypodium distachyon
Bradi1g28100 5.0kb upstream 5.0kb upstream 5000 false Bd1: 23249912-23254911 Brachypodium distachyon
Bradi1g28100 5.0kb downstream 5.0kb downstream 12261 true Bd1: 23237651-23249911 Brachypodium distachyon
Bradi1g28100 5.0kb downstream 5.0kb downstream 5000 false Bd1: 23237651-23242650 Brachypodium distachyon
Bradi1g28100 10.0kb upstream 10.0kb upstream 17261 true Bd1: 23242651-23259911 Brachypodium distachyon
Bradi1g28100 10.0kb upstream 10.0kb upstream 10000 false Bd1: 23249912-23259911 Brachypodium distachyon
Bradi1g28100 10.0kb downstream 10.0kb downstream 17261 true Bd1: 23232651-23249911 Brachypodium distachyon
Bradi1g28100 10.0kb downstream 10.0kb downstream 10000 false Bd1: 23232651-23242650 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026323 5273 Angiosperm View MSA
124573422 5269 Grass View MSA
121347367 5274 Embryophyte View MSA
123423953 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.11        
cufflinks 0.131        
cufflinks 0.063     Low  
cufflinks 0.143        
cufflinks 0.043     Low  
cufflinks 0.129        
cufflinks 0.106        
cufflinks 0.094        
cufflinks 0.099     Low  
cufflinks 0.05     Low  
cufflinks 0.036     Low  
cufflinks 0.076     Low  
cufflinks 0.017     Low Low
cufflinks 0.026     Low Low
cufflinks 0.039     Low  
cufflinks 0.102        
cufflinks 0.135     Low  
cufflinks 0.208       High
cufflinks 0.057     Low  
cufflinks 0.044     Low  
cufflinks 0.078     Low  
cufflinks 0.077     Low  
cufflinks 0.085     Low  
cufflinks 0.094     Low  
cufflinks 0.123        
cufflinks 0.048     Low  
cufflinks 0.049     Low  
cufflinks 0.051     Low  
cufflinks 0.042     Low  
cufflinks 0.107     Low  

0 Strain