Gene : Bradi1g32590 B. distachyon v3.1
Defline:  (1 of 1) 1.1.1.31 - 3-hydroxyisobutyrate dehydrogenase Genomic Order:  4138
Name:  ? Bradi1g32590 Secondary Identifier:  ? PAC:32796858
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon VALDEG-PWY Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g32590 0.5kb upstream 0.5kb upstream 3960 true Bd1: 28051679-28055638 Brachypodium distachyon
Bradi1g32590 0.5kb upstream 0.5kb upstream 500 false Bd1: 28055139-28055638 Brachypodium distachyon
Bradi1g32590 0.5kb downstream 0.5kb downstream 3960 true Bd1: 28051179-28055138 Brachypodium distachyon
Bradi1g32590 0.5kb downstream 0.5kb downstream 500 false Bd1: 28051179-28051678 Brachypodium distachyon
Bradi1g32590 1.0kb upstream 1.0kb upstream 4460 true Bd1: 28051679-28056138 Brachypodium distachyon
Bradi1g32590 1.0kb upstream 1.0kb upstream 1000 false Bd1: 28055139-28056138 Brachypodium distachyon
Bradi1g32590 1.0kb downstream 1.0kb downstream 4460 true Bd1: 28050679-28055138 Brachypodium distachyon
Bradi1g32590 1.0kb downstream 1.0kb downstream 1000 false Bd1: 28050679-28051678 Brachypodium distachyon
Bradi1g32590 2.0kb upstream 2.0kb upstream 5460 true Bd1: 28051679-28057138 Brachypodium distachyon
Bradi1g32590 2.0kb upstream 2.0kb upstream 2000 false Bd1: 28055139-28057138 Brachypodium distachyon
Bradi1g32590 2.0kb downstream 2.0kb downstream 5460 true Bd1: 28049679-28055138 Brachypodium distachyon
Bradi1g32590 2.0kb downstream 2.0kb downstream 2000 false Bd1: 28049679-28051678 Brachypodium distachyon
Bradi1g32590 5.0kb upstream 5.0kb upstream 8460 true Bd1: 28051679-28060138 Brachypodium distachyon
Bradi1g32590 5.0kb upstream 5.0kb upstream 5000 false Bd1: 28055139-28060138 Brachypodium distachyon
Bradi1g32590 5.0kb downstream 5.0kb downstream 8460 true Bd1: 28046679-28055138 Brachypodium distachyon
Bradi1g32590 5.0kb downstream 5.0kb downstream 5000 false Bd1: 28046679-28051678 Brachypodium distachyon
Bradi1g32590 10.0kb upstream 10.0kb upstream 13460 true Bd1: 28051679-28065138 Brachypodium distachyon
Bradi1g32590 10.0kb upstream 10.0kb upstream 10000 false Bd1: 28055139-28065138 Brachypodium distachyon
Bradi1g32590 10.0kb downstream 10.0kb downstream 13460 true Bd1: 28041679-28055138 Brachypodium distachyon
Bradi1g32590 10.0kb downstream 10.0kb downstream 10000 false Bd1: 28041679-28051678 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570878 5269 Grass View MSA
122045971 5273 Angiosperm View MSA
121347535 5274 Embryophyte View MSA
123424560 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.809        
cufflinks 1.024        
cufflinks 1.277        
cufflinks 1.072        
cufflinks 0.925        
cufflinks 0.816        
cufflinks 0.875        
cufflinks 0.591       Low
cufflinks 0.639        
cufflinks 1.63        
cufflinks 1.007        
cufflinks 0.727        
cufflinks 0.639        
cufflinks 0.705        
cufflinks 0.688        
cufflinks 0.994        
cufflinks 0.817        
cufflinks 0.984        
cufflinks 1.366        
cufflinks 4.023       High
cufflinks 0.755        
cufflinks 1.187        
cufflinks 0.533       Low
cufflinks 0.586       Low
cufflinks 0.713        
cufflinks 1.721       High
cufflinks 0.983        
cufflinks 1.756       High
cufflinks 1.324        
cufflinks 1.032        

0 Strain