Gene : Bradi5g09370 B. distachyon v3.1
Defline:  (1 of 1) KOG1985 - Vesicle coat complex COPII, subunit SEC24/subunit SFB2 Genomic Order:  955
Name:  ? Bradi5g09370 Secondary Identifier:  ? PAC:32811858
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g09370 0.5kb upstream 0.5kb upstream 8745 true Bd5: 12763732-12772476 Brachypodium distachyon
Bradi5g09370 0.5kb upstream 0.5kb upstream 500 false Bd5: 12763732-12764231 Brachypodium distachyon
Bradi5g09370 0.5kb downstream 0.5kb downstream 8745 true Bd5: 12764232-12772976 Brachypodium distachyon
Bradi5g09370 0.5kb downstream 0.5kb downstream 500 false Bd5: 12772477-12772976 Brachypodium distachyon
Bradi5g09370 1.0kb upstream 1.0kb upstream 9245 true Bd5: 12763232-12772476 Brachypodium distachyon
Bradi5g09370 1.0kb upstream 1.0kb upstream 1000 false Bd5: 12763232-12764231 Brachypodium distachyon
Bradi5g09370 1.0kb downstream 1.0kb downstream 9245 true Bd5: 12764232-12773476 Brachypodium distachyon
Bradi5g09370 1.0kb downstream 1.0kb downstream 1000 false Bd5: 12772477-12773476 Brachypodium distachyon
Bradi5g09370 2.0kb upstream 2.0kb upstream 10245 true Bd5: 12762232-12772476 Brachypodium distachyon
Bradi5g09370 2.0kb upstream 2.0kb upstream 2000 false Bd5: 12762232-12764231 Brachypodium distachyon
Bradi5g09370 2.0kb downstream 2.0kb downstream 10245 true Bd5: 12764232-12774476 Brachypodium distachyon
Bradi5g09370 2.0kb downstream 2.0kb downstream 2000 false Bd5: 12772477-12774476 Brachypodium distachyon
Bradi5g09370 5.0kb upstream 5.0kb upstream 13245 true Bd5: 12759232-12772476 Brachypodium distachyon
Bradi5g09370 5.0kb upstream 5.0kb upstream 5000 false Bd5: 12759232-12764231 Brachypodium distachyon
Bradi5g09370 5.0kb downstream 5.0kb downstream 13245 true Bd5: 12764232-12777476 Brachypodium distachyon
Bradi5g09370 5.0kb downstream 5.0kb downstream 5000 false Bd5: 12772477-12777476 Brachypodium distachyon
Bradi5g09370 10.0kb upstream 10.0kb upstream 18245 true Bd5: 12754232-12772476 Brachypodium distachyon
Bradi5g09370 10.0kb upstream 10.0kb upstream 10000 false Bd5: 12754232-12764231 Brachypodium distachyon
Bradi5g09370 10.0kb downstream 10.0kb downstream 18245 true Bd5: 12764232-12782476 Brachypodium distachyon
Bradi5g09370 10.0kb downstream 10.0kb downstream 10000 false Bd5: 12772477-12782476 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572788 5269 Grass View MSA
122042222 5273 Angiosperm View MSA
121345983 5274 Embryophyte View MSA
123428151 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.353        
cufflinks 3.324        
cufflinks 2.991        
cufflinks 2.848        
cufflinks 1.664        
cufflinks 2.91        
cufflinks 2.817        
cufflinks 2.498        
cufflinks 2.604        
cufflinks 1.595        
cufflinks 0.736       Low
cufflinks 2.33        
cufflinks 0.682       Low
cufflinks 0.714       Low
cufflinks 1.403        
cufflinks 3.212        
cufflinks 2.123        
cufflinks 4.967       High
cufflinks 2.88        
cufflinks 0.356       Low
cufflinks 3.597        
cufflinks 2.801        
cufflinks 2.509        
cufflinks 2.714        
cufflinks 2.693        
cufflinks 2.542        
cufflinks 0.939       Low
cufflinks 2.404        
cufflinks 2.64        
cufflinks 4.033       High

0 Strain