Gene : Bradi5g10140 B. distachyon v3.1
Defline:  (1 of 2) 6.3.4.21 - Nicotinate phosphoribosyltransferase / Nicotinic acid phosphoribosyltransferase Genomic Order:  1055
Name:  ? Bradi5g10140 Secondary Identifier:  ? PAC:32808877
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-5381 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g10140 0.5kb upstream 0.5kb upstream 9529 true Bd5: 13543273-13552801 Brachypodium distachyon
Bradi5g10140 0.5kb upstream 0.5kb upstream 500 false Bd5: 13543273-13543772 Brachypodium distachyon
Bradi5g10140 0.5kb downstream 0.5kb downstream 9529 true Bd5: 13543773-13553301 Brachypodium distachyon
Bradi5g10140 0.5kb downstream 0.5kb downstream 500 false Bd5: 13552802-13553301 Brachypodium distachyon
Bradi5g10140 1.0kb upstream 1.0kb upstream 10029 true Bd5: 13542773-13552801 Brachypodium distachyon
Bradi5g10140 1.0kb upstream 1.0kb upstream 1000 false Bd5: 13542773-13543772 Brachypodium distachyon
Bradi5g10140 1.0kb downstream 1.0kb downstream 10029 true Bd5: 13543773-13553801 Brachypodium distachyon
Bradi5g10140 1.0kb downstream 1.0kb downstream 1000 false Bd5: 13552802-13553801 Brachypodium distachyon
Bradi5g10140 2.0kb upstream 2.0kb upstream 11029 true Bd5: 13541773-13552801 Brachypodium distachyon
Bradi5g10140 2.0kb upstream 2.0kb upstream 2000 false Bd5: 13541773-13543772 Brachypodium distachyon
Bradi5g10140 2.0kb downstream 2.0kb downstream 11029 true Bd5: 13543773-13554801 Brachypodium distachyon
Bradi5g10140 2.0kb downstream 2.0kb downstream 2000 false Bd5: 13552802-13554801 Brachypodium distachyon
Bradi5g10140 5.0kb upstream 5.0kb upstream 14029 true Bd5: 13538773-13552801 Brachypodium distachyon
Bradi5g10140 5.0kb upstream 5.0kb upstream 5000 false Bd5: 13538773-13543772 Brachypodium distachyon
Bradi5g10140 5.0kb downstream 5.0kb downstream 14029 true Bd5: 13543773-13557801 Brachypodium distachyon
Bradi5g10140 5.0kb downstream 5.0kb downstream 5000 false Bd5: 13552802-13557801 Brachypodium distachyon
Bradi5g10140 10.0kb upstream 10.0kb upstream 19029 true Bd5: 13533773-13552801 Brachypodium distachyon
Bradi5g10140 10.0kb upstream 10.0kb upstream 10000 false Bd5: 13533773-13543772 Brachypodium distachyon
Bradi5g10140 10.0kb downstream 10.0kb downstream 19029 true Bd5: 13543773-13562801 Brachypodium distachyon
Bradi5g10140 10.0kb downstream 10.0kb downstream 10000 false Bd5: 13552802-13562801 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568633 5269 Grass View MSA
122047355 5273 Angiosperm View MSA
121346796 5274 Embryophyte View MSA
123425475 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.63        
cufflinks 4.443        
cufflinks 6.23        
cufflinks 4.812        
cufflinks 2.378       Low
cufflinks 5.845        
cufflinks 4.012        
cufflinks 5.425        
cufflinks 6.211        
cufflinks 4.939        
cufflinks 10.155     High High
cufflinks 8.113        
cufflinks 9.904     High High
cufflinks 9.524     High High
cufflinks 7.996        
cufflinks 7.282        
cufflinks 5.001        
cufflinks 9.662       High
cufflinks 3.415       Low
cufflinks 5.62        
cufflinks 3.83        
cufflinks 6.713        
cufflinks 4.384        
cufflinks 5.803        
cufflinks 4.233        
cufflinks 6.424        
cufflinks 7.558        
cufflinks 5.984        
cufflinks 6.158        
cufflinks 3.936        

0 Strain