Gene : Bradi5g10090 B. distachyon v3.1
Defline:  (1 of 1) PTHR13339 - COP9 SIGNALOSOME COMPLEX SUBUNIT 8 Genomic Order:  1043
Name:  ? Bradi5g10090 Secondary Identifier:  ? PAC:32811074
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g10090 0.5kb upstream 0.5kb upstream 4116 true Bd5: 13479275-13483390 Brachypodium distachyon
Bradi5g10090 0.5kb upstream 0.5kb upstream 500 false Bd5: 13482891-13483390 Brachypodium distachyon
Bradi5g10090 0.5kb downstream 0.5kb downstream 4116 true Bd5: 13478775-13482890 Brachypodium distachyon
Bradi5g10090 0.5kb downstream 0.5kb downstream 500 false Bd5: 13478775-13479274 Brachypodium distachyon
Bradi5g10090 1.0kb upstream 1.0kb upstream 4616 true Bd5: 13479275-13483890 Brachypodium distachyon
Bradi5g10090 1.0kb upstream 1.0kb upstream 1000 false Bd5: 13482891-13483890 Brachypodium distachyon
Bradi5g10090 1.0kb downstream 1.0kb downstream 4616 true Bd5: 13478275-13482890 Brachypodium distachyon
Bradi5g10090 1.0kb downstream 1.0kb downstream 1000 false Bd5: 13478275-13479274 Brachypodium distachyon
Bradi5g10090 2.0kb upstream 2.0kb upstream 5616 true Bd5: 13479275-13484890 Brachypodium distachyon
Bradi5g10090 2.0kb upstream 2.0kb upstream 2000 false Bd5: 13482891-13484890 Brachypodium distachyon
Bradi5g10090 2.0kb downstream 2.0kb downstream 5616 true Bd5: 13477275-13482890 Brachypodium distachyon
Bradi5g10090 2.0kb downstream 2.0kb downstream 2000 false Bd5: 13477275-13479274 Brachypodium distachyon
Bradi5g10090 5.0kb upstream 5.0kb upstream 8616 true Bd5: 13479275-13487890 Brachypodium distachyon
Bradi5g10090 5.0kb upstream 5.0kb upstream 5000 false Bd5: 13482891-13487890 Brachypodium distachyon
Bradi5g10090 5.0kb downstream 5.0kb downstream 8616 true Bd5: 13474275-13482890 Brachypodium distachyon
Bradi5g10090 5.0kb downstream 5.0kb downstream 5000 false Bd5: 13474275-13479274 Brachypodium distachyon
Bradi5g10090 10.0kb upstream 10.0kb upstream 13616 true Bd5: 13479275-13492890 Brachypodium distachyon
Bradi5g10090 10.0kb upstream 10.0kb upstream 10000 false Bd5: 13482891-13492890 Brachypodium distachyon
Bradi5g10090 10.0kb downstream 10.0kb downstream 13616 true Bd5: 13469275-13482890 Brachypodium distachyon
Bradi5g10090 10.0kb downstream 10.0kb downstream 10000 false Bd5: 13469275-13479274 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577603 5269 Grass View MSA
122042983 5273 Angiosperm View MSA
121348837 5274 Embryophyte View MSA
123425224 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.556        
cufflinks 3.718        
cufflinks 3.458        
cufflinks 4.219        
cufflinks 3.218        
cufflinks 3.236        
cufflinks 4.147        
cufflinks 3.826        
cufflinks 3.352        
cufflinks 3.549        
cufflinks 2.913        
cufflinks 2.495       Low
cufflinks 1.454       Low
cufflinks 2.784        
cufflinks 2.57       Low
cufflinks 3.359        
cufflinks 6.122       High
cufflinks 6.266       High
cufflinks 5.702       High
cufflinks 4.445        
cufflinks 4.763        
cufflinks 2.825        
cufflinks 3.217        
cufflinks 3.195        
cufflinks 3.288        
cufflinks 3.631        
cufflinks 3.05        
cufflinks 3.305        
cufflinks 3.195        
cufflinks 3.947        

0 Strain