Gene : Bradi5g10017 B. distachyon v3.1
Defline:  (1 of 1) PTHR13789//PTHR13789:SF234 - MONOOXYGENASE Genomic Order:  1034
Name:  ? Bradi5g10017 Secondary Identifier:  ? PAC:32810134
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g10017 0.5kb upstream 0.5kb upstream 2969 true Bd5: 13410298-13413266 Brachypodium distachyon
Bradi5g10017 0.5kb upstream 0.5kb upstream 500 false Bd5: 13410298-13410797 Brachypodium distachyon
Bradi5g10017 0.5kb downstream 0.5kb downstream 2969 true Bd5: 13410798-13413766 Brachypodium distachyon
Bradi5g10017 0.5kb downstream 0.5kb downstream 500 false Bd5: 13413267-13413766 Brachypodium distachyon
Bradi5g10017 1.0kb upstream 1.0kb upstream 3469 true Bd5: 13409798-13413266 Brachypodium distachyon
Bradi5g10017 1.0kb upstream 1.0kb upstream 1000 false Bd5: 13409798-13410797 Brachypodium distachyon
Bradi5g10017 1.0kb downstream 1.0kb downstream 3469 true Bd5: 13410798-13414266 Brachypodium distachyon
Bradi5g10017 1.0kb downstream 1.0kb downstream 1000 false Bd5: 13413267-13414266 Brachypodium distachyon
Bradi5g10017 2.0kb upstream 2.0kb upstream 4469 true Bd5: 13408798-13413266 Brachypodium distachyon
Bradi5g10017 2.0kb upstream 2.0kb upstream 2000 false Bd5: 13408798-13410797 Brachypodium distachyon
Bradi5g10017 2.0kb downstream 2.0kb downstream 4469 true Bd5: 13410798-13415266 Brachypodium distachyon
Bradi5g10017 2.0kb downstream 2.0kb downstream 2000 false Bd5: 13413267-13415266 Brachypodium distachyon
Bradi5g10017 5.0kb upstream 5.0kb upstream 7469 true Bd5: 13405798-13413266 Brachypodium distachyon
Bradi5g10017 5.0kb upstream 5.0kb upstream 5000 false Bd5: 13405798-13410797 Brachypodium distachyon
Bradi5g10017 5.0kb downstream 5.0kb downstream 7469 true Bd5: 13410798-13418266 Brachypodium distachyon
Bradi5g10017 5.0kb downstream 5.0kb downstream 5000 false Bd5: 13413267-13418266 Brachypodium distachyon
Bradi5g10017 10.0kb upstream 10.0kb upstream 12469 true Bd5: 13400798-13413266 Brachypodium distachyon
Bradi5g10017 10.0kb upstream 10.0kb upstream 10000 false Bd5: 13400798-13410797 Brachypodium distachyon
Bradi5g10017 10.0kb downstream 10.0kb downstream 12469 true Bd5: 13410798-13423266 Brachypodium distachyon
Bradi5g10017 10.0kb downstream 10.0kb downstream 10000 false Bd5: 13413267-13423266 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582132 5269 Grass View MSA
122051519 5273 Angiosperm View MSA
123429089 5275 Viridiplantae View MSA
121349985 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.211        
cufflinks 1.973        
cufflinks 1.63        
cufflinks 3.59        
cufflinks 2.523        
cufflinks 2.841        
cufflinks 2.351        
cufflinks 4.695        
cufflinks 4.165        
cufflinks 3.926        
cufflinks 0.986       Low
cufflinks 2.265        
cufflinks 2.538        
cufflinks 1.094       Low
cufflinks 3.987        
cufflinks 2.224        
cufflinks 5.42       High
cufflinks 4.371        
cufflinks 3.501        
cufflinks 0.242       Low
cufflinks 11.195     High High
cufflinks 2.252        
cufflinks 4.453        
cufflinks 4.041        
cufflinks 3.949        
cufflinks 1.563        
cufflinks 2.486        
cufflinks 2.18        
cufflinks 2.627        
cufflinks 5.291        

0 Strain