Gene : Bradi5g05077 B. distachyon v3.1
Defline:  (1 of 1) PTHR10285:SF53 - URIDINE KINASE Genomic Order:  554
Name:  ? Bradi5g05077 Secondary Identifier:  ? PAC:32808958
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-7193 Brachypodium distachyon pathologic  
Bdistachyon PWY-7196 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g05077 0.5kb upstream 0.5kb upstream 18062 true Bd5: 6499913-6517974 Brachypodium distachyon
Bradi5g05077 0.5kb upstream 0.5kb upstream 500 false Bd5: 6517475-6517974 Brachypodium distachyon
Bradi5g05077 0.5kb downstream 0.5kb downstream 18062 true Bd5: 6499413-6517474 Brachypodium distachyon
Bradi5g05077 0.5kb downstream 0.5kb downstream 500 false Bd5: 6499413-6499912 Brachypodium distachyon
Bradi5g05077 1.0kb upstream 1.0kb upstream 18562 true Bd5: 6499913-6518474 Brachypodium distachyon
Bradi5g05077 1.0kb upstream 1.0kb upstream 1000 false Bd5: 6517475-6518474 Brachypodium distachyon
Bradi5g05077 1.0kb downstream 1.0kb downstream 18562 true Bd5: 6498913-6517474 Brachypodium distachyon
Bradi5g05077 1.0kb downstream 1.0kb downstream 1000 false Bd5: 6498913-6499912 Brachypodium distachyon
Bradi5g05077 2.0kb upstream 2.0kb upstream 19562 true Bd5: 6499913-6519474 Brachypodium distachyon
Bradi5g05077 2.0kb upstream 2.0kb upstream 2000 false Bd5: 6517475-6519474 Brachypodium distachyon
Bradi5g05077 2.0kb downstream 2.0kb downstream 19562 true Bd5: 6497913-6517474 Brachypodium distachyon
Bradi5g05077 2.0kb downstream 2.0kb downstream 2000 false Bd5: 6497913-6499912 Brachypodium distachyon
Bradi5g05077 5.0kb upstream 5.0kb upstream 22562 true Bd5: 6499913-6522474 Brachypodium distachyon
Bradi5g05077 5.0kb upstream 5.0kb upstream 5000 false Bd5: 6517475-6522474 Brachypodium distachyon
Bradi5g05077 5.0kb downstream 5.0kb downstream 22562 true Bd5: 6494913-6517474 Brachypodium distachyon
Bradi5g05077 5.0kb downstream 5.0kb downstream 5000 false Bd5: 6494913-6499912 Brachypodium distachyon
Bradi5g05077 10.0kb upstream 10.0kb upstream 27562 true Bd5: 6499913-6527474 Brachypodium distachyon
Bradi5g05077 10.0kb upstream 10.0kb upstream 10000 false Bd5: 6517475-6527474 Brachypodium distachyon
Bradi5g05077 10.0kb downstream 10.0kb downstream 27562 true Bd5: 6489913-6517474 Brachypodium distachyon
Bradi5g05077 10.0kb downstream 10.0kb downstream 10000 false Bd5: 6489913-6499912 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124588331 5269 Grass View MSA
122044880 5273 Angiosperm View MSA
121351427 5274 Embryophyte View MSA
123427517 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.321        
cufflinks 0.478        
cufflinks 0.508        
cufflinks 0.454        
cufflinks 0.24       Low
cufflinks 0.426        
cufflinks 0.392        
cufflinks 0.364        
cufflinks 0.458        
cufflinks 0.383        
cufflinks 0.636       High
cufflinks 0.457        
cufflinks 0.519        
cufflinks 0.434        
cufflinks 0.345        
cufflinks 0.428        
cufflinks 0.23       Low
cufflinks 0.891       High
cufflinks 0.328        
cufflinks 0.299        
cufflinks 0.321        
cufflinks 0.626       High
cufflinks 0.379        
cufflinks 0.386        
cufflinks 0.401        
cufflinks 0.528        
cufflinks 0.582        
cufflinks 0.513        
cufflinks 0.522        
cufflinks 0.382        

0 Strain