Gene : Bradi5g07720 B. distachyon v3.1
Defline:  (1 of 1) PTHR31945//PTHR31945:SF17 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR Genomic Order:  731
Name:  ? Bradi5g07720 Secondary Identifier:  ? PAC:32810551
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g07720 0.5kb upstream 0.5kb upstream 2820 true Bd5: 10311119-10313938 Brachypodium distachyon
Bradi5g07720 0.5kb upstream 0.5kb upstream 500 false Bd5: 10311119-10311618 Brachypodium distachyon
Bradi5g07720 0.5kb downstream 0.5kb downstream 2820 true Bd5: 10311619-10314438 Brachypodium distachyon
Bradi5g07720 0.5kb downstream 0.5kb downstream 500 false Bd5: 10313939-10314438 Brachypodium distachyon
Bradi5g07720 1.0kb upstream 1.0kb upstream 3320 true Bd5: 10310619-10313938 Brachypodium distachyon
Bradi5g07720 1.0kb upstream 1.0kb upstream 1000 false Bd5: 10310619-10311618 Brachypodium distachyon
Bradi5g07720 1.0kb downstream 1.0kb downstream 3320 true Bd5: 10311619-10314938 Brachypodium distachyon
Bradi5g07720 1.0kb downstream 1.0kb downstream 1000 false Bd5: 10313939-10314938 Brachypodium distachyon
Bradi5g07720 2.0kb upstream 2.0kb upstream 4320 true Bd5: 10309619-10313938 Brachypodium distachyon
Bradi5g07720 2.0kb upstream 2.0kb upstream 2000 false Bd5: 10309619-10311618 Brachypodium distachyon
Bradi5g07720 2.0kb downstream 2.0kb downstream 4320 true Bd5: 10311619-10315938 Brachypodium distachyon
Bradi5g07720 2.0kb downstream 2.0kb downstream 2000 false Bd5: 10313939-10315938 Brachypodium distachyon
Bradi5g07720 5.0kb upstream 5.0kb upstream 7320 true Bd5: 10306619-10313938 Brachypodium distachyon
Bradi5g07720 5.0kb upstream 5.0kb upstream 5000 false Bd5: 10306619-10311618 Brachypodium distachyon
Bradi5g07720 5.0kb downstream 5.0kb downstream 7320 true Bd5: 10311619-10318938 Brachypodium distachyon
Bradi5g07720 5.0kb downstream 5.0kb downstream 5000 false Bd5: 10313939-10318938 Brachypodium distachyon
Bradi5g07720 10.0kb upstream 10.0kb upstream 12320 true Bd5: 10301619-10313938 Brachypodium distachyon
Bradi5g07720 10.0kb upstream 10.0kb upstream 10000 false Bd5: 10301619-10311618 Brachypodium distachyon
Bradi5g07720 10.0kb downstream 10.0kb downstream 12320 true Bd5: 10311619-10323938 Brachypodium distachyon
Bradi5g07720 10.0kb downstream 10.0kb downstream 10000 false Bd5: 10313939-10323938 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580428 5269 Grass View MSA
122047827 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.035     Low Low
cufflinks 0.042     Low  
cufflinks 0.273        
cufflinks 0.04     Low  
cufflinks 0.06     Low  
cufflinks 0.087     Low  
cufflinks 0.086        
cufflinks 0.068     Low  
cufflinks 0.098     Low  
cufflinks 1.122       High
cufflinks 0.014     Low Low
cufflinks 0.062     Low  
cufflinks 0.381        
cufflinks 0.062     Low  
cufflinks 0.143        
cufflinks 0.117        
cufflinks 0.251        
cufflinks 12.509     High High
cufflinks 0.057     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.357       High
cufflinks 0.661        
cufflinks 0.181        
cufflinks 0.073     Low  
cufflinks 0.081     Low  
cufflinks 0.302        
cufflinks 0.033     Low Low
cufflinks 0.645        
cufflinks 0.9       High
cufflinks 0.064     Low  

0 Strain