Gene : Bradi1g33110 B. distachyon v3.1
Defline:  (1 of 1) K12161 - ubiquitin related modifier 1 (URM1) Genomic Order:  4211
Name:  ? Bradi1g33110 Secondary Identifier:  ? PAC:32795069
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g33110 0.5kb upstream 0.5kb upstream 2593 true Bd1: 28823970-28826562 Brachypodium distachyon
Bradi1g33110 0.5kb upstream 0.5kb upstream 500 false Bd1: 28826063-28826562 Brachypodium distachyon
Bradi1g33110 0.5kb downstream 0.5kb downstream 2593 true Bd1: 28823470-28826062 Brachypodium distachyon
Bradi1g33110 0.5kb downstream 0.5kb downstream 500 false Bd1: 28823470-28823969 Brachypodium distachyon
Bradi1g33110 1.0kb upstream 1.0kb upstream 3093 true Bd1: 28823970-28827062 Brachypodium distachyon
Bradi1g33110 1.0kb upstream 1.0kb upstream 1000 false Bd1: 28826063-28827062 Brachypodium distachyon
Bradi1g33110 1.0kb downstream 1.0kb downstream 3093 true Bd1: 28822970-28826062 Brachypodium distachyon
Bradi1g33110 1.0kb downstream 1.0kb downstream 1000 false Bd1: 28822970-28823969 Brachypodium distachyon
Bradi1g33110 2.0kb upstream 2.0kb upstream 4093 true Bd1: 28823970-28828062 Brachypodium distachyon
Bradi1g33110 2.0kb upstream 2.0kb upstream 2000 false Bd1: 28826063-28828062 Brachypodium distachyon
Bradi1g33110 2.0kb downstream 2.0kb downstream 4093 true Bd1: 28821970-28826062 Brachypodium distachyon
Bradi1g33110 2.0kb downstream 2.0kb downstream 2000 false Bd1: 28821970-28823969 Brachypodium distachyon
Bradi1g33110 5.0kb upstream 5.0kb upstream 7093 true Bd1: 28823970-28831062 Brachypodium distachyon
Bradi1g33110 5.0kb upstream 5.0kb upstream 5000 false Bd1: 28826063-28831062 Brachypodium distachyon
Bradi1g33110 5.0kb downstream 5.0kb downstream 7093 true Bd1: 28818970-28826062 Brachypodium distachyon
Bradi1g33110 5.0kb downstream 5.0kb downstream 5000 false Bd1: 28818970-28823969 Brachypodium distachyon
Bradi1g33110 10.0kb upstream 10.0kb upstream 12093 true Bd1: 28823970-28836062 Brachypodium distachyon
Bradi1g33110 10.0kb upstream 10.0kb upstream 10000 false Bd1: 28826063-28836062 Brachypodium distachyon
Bradi1g33110 10.0kb downstream 10.0kb downstream 12093 true Bd1: 28813970-28826062 Brachypodium distachyon
Bradi1g33110 10.0kb downstream 10.0kb downstream 10000 false Bd1: 28813970-28823969 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578759 5269 Grass View MSA
122042702 5273 Angiosperm View MSA
121349915 5274 Embryophyte View MSA
123424285 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.195        
cufflinks 6.526        
cufflinks 10.305        
cufflinks 6.784        
cufflinks 4.261       Low
cufflinks 6.408        
cufflinks 7.034        
cufflinks 5.733        
cufflinks 7.327        
cufflinks 11.312     High High
cufflinks 6.222        
cufflinks 5.807        
cufflinks 5.31        
cufflinks 5.665        
cufflinks 4.372       Low
cufflinks 6.063        
cufflinks 9.41        
cufflinks 13.279     High High
cufflinks 8.585        
cufflinks 4.962       Low
cufflinks 12.128     High High
cufflinks 8.487        
cufflinks 5.117       Low
cufflinks 5.495        
cufflinks 6.138        
cufflinks 11.889     High High
cufflinks 10.27     High  
cufflinks 12.819     High High
cufflinks 10.734        
cufflinks 7.169        

0 Strain