Gene : Bradi1g33240 B. distachyon v3.1
Defline:  (1 of 2) KOG4766 - Uncharacterized conserved protein Genomic Order:  4229
Name:  ? Bradi1g33240 Secondary Identifier:  ? PAC:32796016
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g33240 0.5kb upstream 0.5kb upstream 2453 true Bd1: 28913651-28916103 Brachypodium distachyon
Bradi1g33240 0.5kb upstream 0.5kb upstream 500 false Bd1: 28915604-28916103 Brachypodium distachyon
Bradi1g33240 0.5kb downstream 0.5kb downstream 2453 true Bd1: 28913151-28915603 Brachypodium distachyon
Bradi1g33240 0.5kb downstream 0.5kb downstream 500 false Bd1: 28913151-28913650 Brachypodium distachyon
Bradi1g33240 1.0kb upstream 1.0kb upstream 2953 true Bd1: 28913651-28916603 Brachypodium distachyon
Bradi1g33240 1.0kb upstream 1.0kb upstream 1000 false Bd1: 28915604-28916603 Brachypodium distachyon
Bradi1g33240 1.0kb downstream 1.0kb downstream 2953 true Bd1: 28912651-28915603 Brachypodium distachyon
Bradi1g33240 1.0kb downstream 1.0kb downstream 1000 false Bd1: 28912651-28913650 Brachypodium distachyon
Bradi1g33240 2.0kb upstream 2.0kb upstream 3953 true Bd1: 28913651-28917603 Brachypodium distachyon
Bradi1g33240 2.0kb upstream 2.0kb upstream 2000 false Bd1: 28915604-28917603 Brachypodium distachyon
Bradi1g33240 2.0kb downstream 2.0kb downstream 3953 true Bd1: 28911651-28915603 Brachypodium distachyon
Bradi1g33240 2.0kb downstream 2.0kb downstream 2000 false Bd1: 28911651-28913650 Brachypodium distachyon
Bradi1g33240 5.0kb upstream 5.0kb upstream 6953 true Bd1: 28913651-28920603 Brachypodium distachyon
Bradi1g33240 5.0kb upstream 5.0kb upstream 5000 false Bd1: 28915604-28920603 Brachypodium distachyon
Bradi1g33240 5.0kb downstream 5.0kb downstream 6953 true Bd1: 28908651-28915603 Brachypodium distachyon
Bradi1g33240 5.0kb downstream 5.0kb downstream 5000 false Bd1: 28908651-28913650 Brachypodium distachyon
Bradi1g33240 10.0kb upstream 10.0kb upstream 11953 true Bd1: 28913651-28925603 Brachypodium distachyon
Bradi1g33240 10.0kb upstream 10.0kb upstream 10000 false Bd1: 28915604-28925603 Brachypodium distachyon
Bradi1g33240 10.0kb downstream 10.0kb downstream 11953 true Bd1: 28903651-28915603 Brachypodium distachyon
Bradi1g33240 10.0kb downstream 10.0kb downstream 10000 false Bd1: 28903651-28913650 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124587452 5269 Grass View MSA
122043328 5273 Angiosperm View MSA
121346242 5274 Embryophyte View MSA
123427938 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 94.088     High  
cufflinks 70.851     High Low
cufflinks 76.864     High  
cufflinks 114.467     High  
cufflinks 187.762     High  
cufflinks 70.001     High Low
cufflinks 78.81     High  
cufflinks 71.637     High Low
cufflinks 67.686     High Low
cufflinks 214.226     High High
cufflinks 100.985     High  
cufflinks 56.064     High Low
cufflinks 79.313     High  
cufflinks 97.377     High  
cufflinks 114.269     High  
cufflinks 54.042     High Low
cufflinks 146.239     High  
cufflinks 98.577     High  
cufflinks 166.21     High  
cufflinks 523.553     High High
cufflinks 327.034     High High
cufflinks 75.058     High  
cufflinks 79.058     High  
cufflinks 79.693     High  
cufflinks 107.776     High  
cufflinks 147.677     High  
cufflinks 97.953     High  
cufflinks 156.488     High  
cufflinks 133.849     High  
cufflinks 125.299     High  

0 Strain