Gene : Bradi1g33210 B. distachyon v3.1
Defline:  (1 of 1) 3.4.24.59 - Mitochondrial intermediate peptidase Genomic Order:  4223
Name:  ? Bradi1g33210 Secondary Identifier:  ? PAC:32792550
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g33210 0.5kb upstream 0.5kb upstream 9245 true Bd1: 28894205-28903449 Brachypodium distachyon
Bradi1g33210 0.5kb upstream 0.5kb upstream 500 false Bd1: 28894205-28894704 Brachypodium distachyon
Bradi1g33210 0.5kb downstream 0.5kb downstream 9245 true Bd1: 28894705-28903949 Brachypodium distachyon
Bradi1g33210 0.5kb downstream 0.5kb downstream 500 false Bd1: 28903450-28903949 Brachypodium distachyon
Bradi1g33210 1.0kb upstream 1.0kb upstream 9745 true Bd1: 28893705-28903449 Brachypodium distachyon
Bradi1g33210 1.0kb upstream 1.0kb upstream 1000 false Bd1: 28893705-28894704 Brachypodium distachyon
Bradi1g33210 1.0kb downstream 1.0kb downstream 9745 true Bd1: 28894705-28904449 Brachypodium distachyon
Bradi1g33210 1.0kb downstream 1.0kb downstream 1000 false Bd1: 28903450-28904449 Brachypodium distachyon
Bradi1g33210 2.0kb upstream 2.0kb upstream 10745 true Bd1: 28892705-28903449 Brachypodium distachyon
Bradi1g33210 2.0kb upstream 2.0kb upstream 2000 false Bd1: 28892705-28894704 Brachypodium distachyon
Bradi1g33210 2.0kb downstream 2.0kb downstream 10745 true Bd1: 28894705-28905449 Brachypodium distachyon
Bradi1g33210 2.0kb downstream 2.0kb downstream 2000 false Bd1: 28903450-28905449 Brachypodium distachyon
Bradi1g33210 5.0kb upstream 5.0kb upstream 13745 true Bd1: 28889705-28903449 Brachypodium distachyon
Bradi1g33210 5.0kb upstream 5.0kb upstream 5000 false Bd1: 28889705-28894704 Brachypodium distachyon
Bradi1g33210 5.0kb downstream 5.0kb downstream 13745 true Bd1: 28894705-28908449 Brachypodium distachyon
Bradi1g33210 5.0kb downstream 5.0kb downstream 5000 false Bd1: 28903450-28908449 Brachypodium distachyon
Bradi1g33210 10.0kb upstream 10.0kb upstream 18745 true Bd1: 28884705-28903449 Brachypodium distachyon
Bradi1g33210 10.0kb upstream 10.0kb upstream 10000 false Bd1: 28884705-28894704 Brachypodium distachyon
Bradi1g33210 10.0kb downstream 10.0kb downstream 18745 true Bd1: 28894705-28913449 Brachypodium distachyon
Bradi1g33210 10.0kb downstream 10.0kb downstream 10000 false Bd1: 28903450-28913449 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569983 5269 Grass View MSA
122047450 5273 Angiosperm View MSA
121347526 5274 Embryophyte View MSA
123424880 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.706       Low
cufflinks 2.463       High
cufflinks 2.524       High
cufflinks 1.927        
cufflinks 0.792       Low
cufflinks 2.226        
cufflinks 2.026        
cufflinks 1.492        
cufflinks 1.975        
cufflinks 1.502        
cufflinks 1.135        
cufflinks 2.117        
cufflinks 1.173        
cufflinks 0.839       Low
cufflinks 0.793       Low
cufflinks 2.154        
cufflinks 1.014        
cufflinks 2.082        
cufflinks 1.263        
cufflinks 0.439       Low
cufflinks 0.966        
cufflinks 2.302       High
cufflinks 1.566        
cufflinks 1.546        
cufflinks 1.825        
cufflinks 1.861        
cufflinks 0.824       Low
cufflinks 1.761        
cufflinks 1.722        
cufflinks 2.204        

0 Strain