Gene : Bradi1g33560 B. distachyon v3.1
Defline:  (1 of 1) K03515 - DNA repair protein REV1 (REV1) Genomic Order:  4276
Name:  ? Bradi1g33560 Secondary Identifier:  ? PAC:32800326
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g33560 0.5kb upstream 0.5kb upstream 11891 true Bd1: 29210855-29222745 Brachypodium distachyon
Bradi1g33560 0.5kb upstream 0.5kb upstream 500 false Bd1: 29210855-29211354 Brachypodium distachyon
Bradi1g33560 0.5kb downstream 0.5kb downstream 11891 true Bd1: 29211355-29223245 Brachypodium distachyon
Bradi1g33560 0.5kb downstream 0.5kb downstream 500 false Bd1: 29222746-29223245 Brachypodium distachyon
Bradi1g33560 1.0kb upstream 1.0kb upstream 12391 true Bd1: 29210355-29222745 Brachypodium distachyon
Bradi1g33560 1.0kb upstream 1.0kb upstream 1000 false Bd1: 29210355-29211354 Brachypodium distachyon
Bradi1g33560 1.0kb downstream 1.0kb downstream 12391 true Bd1: 29211355-29223745 Brachypodium distachyon
Bradi1g33560 1.0kb downstream 1.0kb downstream 1000 false Bd1: 29222746-29223745 Brachypodium distachyon
Bradi1g33560 2.0kb upstream 2.0kb upstream 13391 true Bd1: 29209355-29222745 Brachypodium distachyon
Bradi1g33560 2.0kb upstream 2.0kb upstream 2000 false Bd1: 29209355-29211354 Brachypodium distachyon
Bradi1g33560 2.0kb downstream 2.0kb downstream 13391 true Bd1: 29211355-29224745 Brachypodium distachyon
Bradi1g33560 2.0kb downstream 2.0kb downstream 2000 false Bd1: 29222746-29224745 Brachypodium distachyon
Bradi1g33560 5.0kb upstream 5.0kb upstream 16391 true Bd1: 29206355-29222745 Brachypodium distachyon
Bradi1g33560 5.0kb upstream 5.0kb upstream 5000 false Bd1: 29206355-29211354 Brachypodium distachyon
Bradi1g33560 5.0kb downstream 5.0kb downstream 16391 true Bd1: 29211355-29227745 Brachypodium distachyon
Bradi1g33560 5.0kb downstream 5.0kb downstream 5000 false Bd1: 29222746-29227745 Brachypodium distachyon
Bradi1g33560 10.0kb upstream 10.0kb upstream 21391 true Bd1: 29201355-29222745 Brachypodium distachyon
Bradi1g33560 10.0kb upstream 10.0kb upstream 10000 false Bd1: 29201355-29211354 Brachypodium distachyon
Bradi1g33560 10.0kb downstream 10.0kb downstream 21391 true Bd1: 29211355-29232745 Brachypodium distachyon
Bradi1g33560 10.0kb downstream 10.0kb downstream 10000 false Bd1: 29222746-29232745 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577425 5269 Grass View MSA
122041911 5273 Angiosperm View MSA
121346043 5274 Embryophyte View MSA
123380311 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.781        
cufflinks 2.175       High
cufflinks 1.667        
cufflinks 1.48        
cufflinks 0.344       Low
cufflinks 1.666        
cufflinks 1.918        
cufflinks 1.121        
cufflinks 1.497        
cufflinks 0.793        
cufflinks 2.166       High
cufflinks 1.351        
cufflinks 1.141        
cufflinks 1.417        
cufflinks 0.547        
cufflinks 1.681        
cufflinks 1.044        
cufflinks 1.693        
cufflinks 0.896        
cufflinks 0.121     Low Low
cufflinks 0.759        
cufflinks 1.425        
cufflinks 1.071        
cufflinks 1.13        
cufflinks 1.473        
cufflinks 1.307        
cufflinks 1.376        
cufflinks 1.371        
cufflinks 1.28        
cufflinks 1.028        

0 Strain