Gene : Bradi5g17990 B. distachyon v3.1
Defline:  (1 of 4) K17686 - Cu+-exporting ATPase (copA, ATP7) Genomic Order:  2074
Name:  ? Bradi5g17990 Secondary Identifier:  ? PAC:32807415
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g17990 0.5kb upstream 0.5kb upstream 6957 true Bd5: 21257482-21264438 Brachypodium distachyon
Bradi5g17990 0.5kb upstream 0.5kb upstream 500 false Bd5: 21257482-21257981 Brachypodium distachyon
Bradi5g17990 0.5kb downstream 0.5kb downstream 6957 true Bd5: 21257982-21264938 Brachypodium distachyon
Bradi5g17990 0.5kb downstream 0.5kb downstream 500 false Bd5: 21264439-21264938 Brachypodium distachyon
Bradi5g17990 1.0kb upstream 1.0kb upstream 7457 true Bd5: 21256982-21264438 Brachypodium distachyon
Bradi5g17990 1.0kb upstream 1.0kb upstream 1000 false Bd5: 21256982-21257981 Brachypodium distachyon
Bradi5g17990 1.0kb downstream 1.0kb downstream 7457 true Bd5: 21257982-21265438 Brachypodium distachyon
Bradi5g17990 1.0kb downstream 1.0kb downstream 1000 false Bd5: 21264439-21265438 Brachypodium distachyon
Bradi5g17990 2.0kb upstream 2.0kb upstream 8457 true Bd5: 21255982-21264438 Brachypodium distachyon
Bradi5g17990 2.0kb upstream 2.0kb upstream 2000 false Bd5: 21255982-21257981 Brachypodium distachyon
Bradi5g17990 2.0kb downstream 2.0kb downstream 8457 true Bd5: 21257982-21266438 Brachypodium distachyon
Bradi5g17990 2.0kb downstream 2.0kb downstream 2000 false Bd5: 21264439-21266438 Brachypodium distachyon
Bradi5g17990 5.0kb upstream 5.0kb upstream 11457 true Bd5: 21252982-21264438 Brachypodium distachyon
Bradi5g17990 5.0kb upstream 5.0kb upstream 5000 false Bd5: 21252982-21257981 Brachypodium distachyon
Bradi5g17990 5.0kb downstream 5.0kb downstream 11457 true Bd5: 21257982-21269438 Brachypodium distachyon
Bradi5g17990 5.0kb downstream 5.0kb downstream 5000 false Bd5: 21264439-21269438 Brachypodium distachyon
Bradi5g17990 10.0kb upstream 10.0kb upstream 16457 true Bd5: 21247982-21264438 Brachypodium distachyon
Bradi5g17990 10.0kb upstream 10.0kb upstream 10000 false Bd5: 21247982-21257981 Brachypodium distachyon
Bradi5g17990 10.0kb downstream 10.0kb downstream 16457 true Bd5: 21257982-21274438 Brachypodium distachyon
Bradi5g17990 10.0kb downstream 10.0kb downstream 10000 false Bd5: 21264439-21274438 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570086 5269 Grass View MSA
122042760 5273 Angiosperm View MSA
121351146 5274 Embryophyte View MSA
123426796 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.909        
cufflinks 0.681        
cufflinks 0.74        
cufflinks 0.696        
cufflinks 0.263       Low
cufflinks 0.463        
cufflinks 0.551        
cufflinks 0.688        
cufflinks 0.538        
cufflinks 0.527        
cufflinks 1.488       High
cufflinks 0.559        
cufflinks 1.222        
cufflinks 1.1        
cufflinks 1.149        
cufflinks 0.61        
cufflinks 0.558        
cufflinks 7.698       High
cufflinks 0.284       Low
cufflinks 0.172       Low
cufflinks 1.987       High
cufflinks 0.808        
cufflinks 0.703        
cufflinks 0.592        
cufflinks 0.453        
cufflinks 0.549        
cufflinks 0.558        
cufflinks 0.729        
cufflinks 0.747        
cufflinks 0.557        

0 Strain