Gene : Bradi5g14860 B. distachyon v3.1
Defline:  (1 of 1) PF13202//PF13405//PF13833 - EF hand (EF-hand_5) // EF-hand domain (EF-hand_6) // EF-hand domain pair (EF-hand_8) Genomic Order:  1671
Name:  ? Bradi5g14860 Secondary Identifier:  ? PAC:32807048
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g14860 0.5kb upstream 0.5kb upstream 4772 true Bd5: 18423772-18428543 Brachypodium distachyon
Bradi5g14860 0.5kb upstream 0.5kb upstream 500 false Bd5: 18423772-18424271 Brachypodium distachyon
Bradi5g14860 0.5kb downstream 0.5kb downstream 4772 true Bd5: 18424272-18429043 Brachypodium distachyon
Bradi5g14860 0.5kb downstream 0.5kb downstream 500 false Bd5: 18428544-18429043 Brachypodium distachyon
Bradi5g14860 1.0kb upstream 1.0kb upstream 5272 true Bd5: 18423272-18428543 Brachypodium distachyon
Bradi5g14860 1.0kb upstream 1.0kb upstream 1000 false Bd5: 18423272-18424271 Brachypodium distachyon
Bradi5g14860 1.0kb downstream 1.0kb downstream 5272 true Bd5: 18424272-18429543 Brachypodium distachyon
Bradi5g14860 1.0kb downstream 1.0kb downstream 1000 false Bd5: 18428544-18429543 Brachypodium distachyon
Bradi5g14860 2.0kb upstream 2.0kb upstream 6272 true Bd5: 18422272-18428543 Brachypodium distachyon
Bradi5g14860 2.0kb upstream 2.0kb upstream 2000 false Bd5: 18422272-18424271 Brachypodium distachyon
Bradi5g14860 2.0kb downstream 2.0kb downstream 6272 true Bd5: 18424272-18430543 Brachypodium distachyon
Bradi5g14860 2.0kb downstream 2.0kb downstream 2000 false Bd5: 18428544-18430543 Brachypodium distachyon
Bradi5g14860 5.0kb upstream 5.0kb upstream 9272 true Bd5: 18419272-18428543 Brachypodium distachyon
Bradi5g14860 5.0kb upstream 5.0kb upstream 5000 false Bd5: 18419272-18424271 Brachypodium distachyon
Bradi5g14860 5.0kb downstream 5.0kb downstream 9272 true Bd5: 18424272-18433543 Brachypodium distachyon
Bradi5g14860 5.0kb downstream 5.0kb downstream 5000 false Bd5: 18428544-18433543 Brachypodium distachyon
Bradi5g14860 10.0kb upstream 10.0kb upstream 14272 true Bd5: 18414272-18428543 Brachypodium distachyon
Bradi5g14860 10.0kb upstream 10.0kb upstream 10000 false Bd5: 18414272-18424271 Brachypodium distachyon
Bradi5g14860 10.0kb downstream 10.0kb downstream 14272 true Bd5: 18424272-18438543 Brachypodium distachyon
Bradi5g14860 10.0kb downstream 10.0kb downstream 10000 false Bd5: 18428544-18438543 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571834 5269 Grass View MSA
122041646 5273 Angiosperm View MSA
121347886 5274 Embryophyte View MSA
123424828 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.971     High  
cufflinks 11.936     High  
cufflinks 14.221     High  
cufflinks 12.87     High  
cufflinks 9.264     High  
cufflinks 8.211        
cufflinks 9.005        
cufflinks 9.075        
cufflinks 8.698        
cufflinks 13.873     High  
cufflinks 9.732     High  
cufflinks 9.916     High  
cufflinks 8.671     High  
cufflinks 6.659       Low
cufflinks 11.846     High  
cufflinks 10.004     High  
cufflinks 8.759        
cufflinks 23.996     High High
cufflinks 12.347        
cufflinks 19.247     High High
cufflinks 15.68     High  
cufflinks 13.965     High  
cufflinks 8.559        
cufflinks 8.267        
cufflinks 8.374        
cufflinks 16.832     High High
cufflinks 7.874       Low
cufflinks 16.884     High High
cufflinks 15.298     High  
cufflinks 16.08     High  

0 Strain