Gene : Bradi5g15300 B. distachyon v3.1
Defline:  (1 of 1) PTHR21493//PTHR21493:SF119//PTHR23180//PTHR23180:SF243 - CGI-141-RELATED/LIPASE CONTAINING PROTEIN // TRIGLYCERIDE LIPASE-RELATED // CENTAURIN/ARF // SUBFAMILY NOT NAMED Genomic Order:  1726
Name:  ? Bradi5g15300 Secondary Identifier:  ? PAC:32807295
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon LIPAS-PWY Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g15300 0.5kb upstream 0.5kb upstream 11138 true Bd5: 18787322-18798459 Brachypodium distachyon
Bradi5g15300 0.5kb upstream 0.5kb upstream 500 false Bd5: 18787322-18787821 Brachypodium distachyon
Bradi5g15300 0.5kb downstream 0.5kb downstream 11138 true Bd5: 18787822-18798959 Brachypodium distachyon
Bradi5g15300 0.5kb downstream 0.5kb downstream 500 false Bd5: 18798460-18798959 Brachypodium distachyon
Bradi5g15300 1.0kb upstream 1.0kb upstream 11638 true Bd5: 18786822-18798459 Brachypodium distachyon
Bradi5g15300 1.0kb upstream 1.0kb upstream 1000 false Bd5: 18786822-18787821 Brachypodium distachyon
Bradi5g15300 1.0kb downstream 1.0kb downstream 11638 true Bd5: 18787822-18799459 Brachypodium distachyon
Bradi5g15300 1.0kb downstream 1.0kb downstream 1000 false Bd5: 18798460-18799459 Brachypodium distachyon
Bradi5g15300 2.0kb upstream 2.0kb upstream 12638 true Bd5: 18785822-18798459 Brachypodium distachyon
Bradi5g15300 2.0kb upstream 2.0kb upstream 2000 false Bd5: 18785822-18787821 Brachypodium distachyon
Bradi5g15300 2.0kb downstream 2.0kb downstream 12638 true Bd5: 18787822-18800459 Brachypodium distachyon
Bradi5g15300 2.0kb downstream 2.0kb downstream 2000 false Bd5: 18798460-18800459 Brachypodium distachyon
Bradi5g15300 5.0kb upstream 5.0kb upstream 15638 true Bd5: 18782822-18798459 Brachypodium distachyon
Bradi5g15300 5.0kb upstream 5.0kb upstream 5000 false Bd5: 18782822-18787821 Brachypodium distachyon
Bradi5g15300 5.0kb downstream 5.0kb downstream 15638 true Bd5: 18787822-18803459 Brachypodium distachyon
Bradi5g15300 5.0kb downstream 5.0kb downstream 5000 false Bd5: 18798460-18803459 Brachypodium distachyon
Bradi5g15300 10.0kb upstream 10.0kb upstream 20638 true Bd5: 18777822-18798459 Brachypodium distachyon
Bradi5g15300 10.0kb upstream 10.0kb upstream 10000 false Bd5: 18777822-18787821 Brachypodium distachyon
Bradi5g15300 10.0kb downstream 10.0kb downstream 20638 true Bd5: 18787822-18808459 Brachypodium distachyon
Bradi5g15300 10.0kb downstream 10.0kb downstream 10000 false Bd5: 18798460-18808459 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568585 5269 Grass View MSA
122043769 5273 Angiosperm View MSA
121350086 5274 Embryophyte View MSA
123428676 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.426        
cufflinks 1.064        
cufflinks 1.195        
cufflinks 1.267        
cufflinks 0.319       Low
cufflinks 0.832        
cufflinks 0.694        
cufflinks 1.084        
cufflinks 1.058        
cufflinks 0.626        
cufflinks 1.796       High
cufflinks 0.916        
cufflinks 1.241        
cufflinks 1.297        
cufflinks 0.85        
cufflinks 0.825        
cufflinks 0.493        
cufflinks 0.29       Low
cufflinks 0.288       Low
cufflinks 0.333       Low
cufflinks 0.397       Low
cufflinks 1.032        
cufflinks 1.289        
cufflinks 1.058        
cufflinks 0.876        
cufflinks 0.961        
cufflinks 1.675       High
cufflinks 0.979        
cufflinks 0.979        
cufflinks 0.394       Low

0 Strain