Gene : Bradi1g34060 B. distachyon v3.1
Defline:  (1 of 38) PF06203 - CCT motif (CCT) Genomic Order:  4342
Name:  ? Bradi1g34060 Secondary Identifier:  ? PAC:32794687
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g34060 0.5kb upstream 0.5kb upstream 5157 true Bd1: 29727741-29732897 Brachypodium distachyon
Bradi1g34060 0.5kb upstream 0.5kb upstream 500 false Bd1: 29727741-29728240 Brachypodium distachyon
Bradi1g34060 0.5kb downstream 0.5kb downstream 5157 true Bd1: 29728241-29733397 Brachypodium distachyon
Bradi1g34060 0.5kb downstream 0.5kb downstream 500 false Bd1: 29732898-29733397 Brachypodium distachyon
Bradi1g34060 1.0kb upstream 1.0kb upstream 5657 true Bd1: 29727241-29732897 Brachypodium distachyon
Bradi1g34060 1.0kb upstream 1.0kb upstream 1000 false Bd1: 29727241-29728240 Brachypodium distachyon
Bradi1g34060 1.0kb downstream 1.0kb downstream 5657 true Bd1: 29728241-29733897 Brachypodium distachyon
Bradi1g34060 1.0kb downstream 1.0kb downstream 1000 false Bd1: 29732898-29733897 Brachypodium distachyon
Bradi1g34060 2.0kb upstream 2.0kb upstream 6657 true Bd1: 29726241-29732897 Brachypodium distachyon
Bradi1g34060 2.0kb upstream 2.0kb upstream 2000 false Bd1: 29726241-29728240 Brachypodium distachyon
Bradi1g34060 2.0kb downstream 2.0kb downstream 6657 true Bd1: 29728241-29734897 Brachypodium distachyon
Bradi1g34060 2.0kb downstream 2.0kb downstream 2000 false Bd1: 29732898-29734897 Brachypodium distachyon
Bradi1g34060 5.0kb upstream 5.0kb upstream 9657 true Bd1: 29723241-29732897 Brachypodium distachyon
Bradi1g34060 5.0kb upstream 5.0kb upstream 5000 false Bd1: 29723241-29728240 Brachypodium distachyon
Bradi1g34060 5.0kb downstream 5.0kb downstream 9657 true Bd1: 29728241-29737897 Brachypodium distachyon
Bradi1g34060 5.0kb downstream 5.0kb downstream 5000 false Bd1: 29732898-29737897 Brachypodium distachyon
Bradi1g34060 10.0kb upstream 10.0kb upstream 14657 true Bd1: 29718241-29732897 Brachypodium distachyon
Bradi1g34060 10.0kb upstream 10.0kb upstream 10000 false Bd1: 29718241-29728240 Brachypodium distachyon
Bradi1g34060 10.0kb downstream 10.0kb downstream 14657 true Bd1: 29728241-29742897 Brachypodium distachyon
Bradi1g34060 10.0kb downstream 10.0kb downstream 10000 false Bd1: 29732898-29742897 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569975 5269 Grass View MSA
122044342 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121310281 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.796        
cufflinks 0.679        
cufflinks 0.535        
cufflinks 0.547        
cufflinks 1.006       High
cufflinks 0.7        
cufflinks 0.717        
cufflinks 0.803        
cufflinks 0.767        
cufflinks 0.618        
cufflinks 0.697        
cufflinks 0.653        
cufflinks 0.765        
cufflinks 0.514       Low
cufflinks 0.647        
cufflinks 0.584        
cufflinks 0.802        
cufflinks 1.082       High
cufflinks 0.813        
cufflinks 0.577        
cufflinks 1.12       High
cufflinks 0.654        
cufflinks 0.753        
cufflinks 0.691        
cufflinks 0.66        
cufflinks 0.536        
cufflinks 0.631        
cufflinks 0.55        
cufflinks 0.532        
cufflinks 0.973       High

0 Strain