Gene : Bradi5g20315 B. distachyon v3.1
Defline:  (1 of 1) PTHR33621:SF2 - T17B22.18 PROTEIN Genomic Order:  2358
Name:  ? Bradi5g20315 Secondary Identifier:  ? PAC:32807314
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g20315 0.5kb upstream 0.5kb upstream 3808 true Bd5: 23369723-23373530 Brachypodium distachyon
Bradi5g20315 0.5kb upstream 0.5kb upstream 500 false Bd5: 23369723-23370222 Brachypodium distachyon
Bradi5g20315 0.5kb downstream 0.5kb downstream 3808 true Bd5: 23370223-23374030 Brachypodium distachyon
Bradi5g20315 0.5kb downstream 0.5kb downstream 500 false Bd5: 23373531-23374030 Brachypodium distachyon
Bradi5g20315 1.0kb upstream 1.0kb upstream 4308 true Bd5: 23369223-23373530 Brachypodium distachyon
Bradi5g20315 1.0kb upstream 1.0kb upstream 1000 false Bd5: 23369223-23370222 Brachypodium distachyon
Bradi5g20315 1.0kb downstream 1.0kb downstream 4308 true Bd5: 23370223-23374530 Brachypodium distachyon
Bradi5g20315 1.0kb downstream 1.0kb downstream 1000 false Bd5: 23373531-23374530 Brachypodium distachyon
Bradi5g20315 2.0kb upstream 2.0kb upstream 5308 true Bd5: 23368223-23373530 Brachypodium distachyon
Bradi5g20315 2.0kb upstream 2.0kb upstream 2000 false Bd5: 23368223-23370222 Brachypodium distachyon
Bradi5g20315 2.0kb downstream 2.0kb downstream 5308 true Bd5: 23370223-23375530 Brachypodium distachyon
Bradi5g20315 2.0kb downstream 2.0kb downstream 2000 false Bd5: 23373531-23375530 Brachypodium distachyon
Bradi5g20315 5.0kb upstream 5.0kb upstream 8308 true Bd5: 23365223-23373530 Brachypodium distachyon
Bradi5g20315 5.0kb upstream 5.0kb upstream 5000 false Bd5: 23365223-23370222 Brachypodium distachyon
Bradi5g20315 5.0kb downstream 5.0kb downstream 8308 true Bd5: 23370223-23378530 Brachypodium distachyon
Bradi5g20315 5.0kb downstream 5.0kb downstream 5000 false Bd5: 23373531-23378530 Brachypodium distachyon
Bradi5g20315 10.0kb upstream 10.0kb upstream 13308 true Bd5: 23360223-23373530 Brachypodium distachyon
Bradi5g20315 10.0kb upstream 10.0kb upstream 10000 false Bd5: 23360223-23370222 Brachypodium distachyon
Bradi5g20315 10.0kb downstream 10.0kb downstream 13308 true Bd5: 23370223-23383530 Brachypodium distachyon
Bradi5g20315 10.0kb downstream 10.0kb downstream 10000 false Bd5: 23373531-23383530 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582514 5269 Grass View MSA
122049048 5273 Angiosperm View MSA
121351117 5274 Embryophyte View MSA
123382012 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.828        
cufflinks 3.104        
cufflinks 3.405        
cufflinks 2.581        
cufflinks 1.201        
cufflinks 2.84        
cufflinks 2.831        
cufflinks 2.085        
cufflinks 2.107        
cufflinks 1.967        
cufflinks 0.048     Low Low
cufflinks 2.685        
cufflinks 0.025     Low Low
cufflinks 0.007     Low Low
cufflinks 0.493        
cufflinks 2.027        
cufflinks 1.333        
cufflinks 4.1        
cufflinks 1.91        
cufflinks 0.074     Low Low
cufflinks 1.343        
cufflinks 3.19        
cufflinks 2.117        
cufflinks 1.88        
cufflinks 2.627        
cufflinks 3.258        
cufflinks 0.026     Low Low
cufflinks 2.667        
cufflinks 2.344        
cufflinks 3.536        

0 Strain