Gene : Bradi1g34525 B. distachyon v3.1
Defline:  (1 of 1) PTHR10366//PTHR10366:SF343 - NAD DEPENDENT EPIMERASE/DEHYDRATASE Genomic Order:  4410
Name:  ? Bradi1g34525 Secondary Identifier:  ? PAC:32794139
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g34525 0.5kb upstream 0.5kb upstream 6787 true Bd1: 30226005-30232791 Brachypodium distachyon
Bradi1g34525 0.5kb upstream 0.5kb upstream 500 false Bd1: 30232292-30232791 Brachypodium distachyon
Bradi1g34525 0.5kb downstream 0.5kb downstream 6787 true Bd1: 30225505-30232291 Brachypodium distachyon
Bradi1g34525 0.5kb downstream 0.5kb downstream 500 false Bd1: 30225505-30226004 Brachypodium distachyon
Bradi1g34525 1.0kb upstream 1.0kb upstream 7287 true Bd1: 30226005-30233291 Brachypodium distachyon
Bradi1g34525 1.0kb upstream 1.0kb upstream 1000 false Bd1: 30232292-30233291 Brachypodium distachyon
Bradi1g34525 1.0kb downstream 1.0kb downstream 7287 true Bd1: 30225005-30232291 Brachypodium distachyon
Bradi1g34525 1.0kb downstream 1.0kb downstream 1000 false Bd1: 30225005-30226004 Brachypodium distachyon
Bradi1g34525 2.0kb upstream 2.0kb upstream 8287 true Bd1: 30226005-30234291 Brachypodium distachyon
Bradi1g34525 2.0kb upstream 2.0kb upstream 2000 false Bd1: 30232292-30234291 Brachypodium distachyon
Bradi1g34525 2.0kb downstream 2.0kb downstream 8287 true Bd1: 30224005-30232291 Brachypodium distachyon
Bradi1g34525 2.0kb downstream 2.0kb downstream 2000 false Bd1: 30224005-30226004 Brachypodium distachyon
Bradi1g34525 5.0kb upstream 5.0kb upstream 11287 true Bd1: 30226005-30237291 Brachypodium distachyon
Bradi1g34525 5.0kb upstream 5.0kb upstream 5000 false Bd1: 30232292-30237291 Brachypodium distachyon
Bradi1g34525 5.0kb downstream 5.0kb downstream 11287 true Bd1: 30221005-30232291 Brachypodium distachyon
Bradi1g34525 5.0kb downstream 5.0kb downstream 5000 false Bd1: 30221005-30226004 Brachypodium distachyon
Bradi1g34525 10.0kb upstream 10.0kb upstream 16287 true Bd1: 30226005-30242291 Brachypodium distachyon
Bradi1g34525 10.0kb upstream 10.0kb upstream 10000 false Bd1: 30232292-30242291 Brachypodium distachyon
Bradi1g34525 10.0kb downstream 10.0kb downstream 16287 true Bd1: 30216005-30232291 Brachypodium distachyon
Bradi1g34525 10.0kb downstream 10.0kb downstream 10000 false Bd1: 30216005-30226004 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578350 5269 Grass View MSA
122046159 5273 Angiosperm View MSA
121349944 5274 Embryophyte View MSA
123424676 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.95     High  
cufflinks 19.705     High  
cufflinks 41.99     High  
cufflinks 32.074     High  
cufflinks 24.152     High  
cufflinks 30.488     High  
cufflinks 16.934     High  
cufflinks 55.916     High  
cufflinks 46.023     High  
cufflinks 80.044     High  
cufflinks 58.244     High  
cufflinks 47.317     High  
cufflinks 70.782     High  
cufflinks 74.548     High  
cufflinks 55.491     High  
cufflinks 37.782     High  
cufflinks 42.282     High  
cufflinks 0.691       Low
cufflinks 9.923        
cufflinks 17.395     High  
cufflinks 7.706       Low
cufflinks 69.102     High  
cufflinks 61.407     High  
cufflinks 47.248     High  
cufflinks 31.764     High  
cufflinks 54.151     High  
cufflinks 68.468     High  
cufflinks 54.77     High  
cufflinks 59.405     High  
cufflinks 6.262       Low

0 Strain