Gene : Bradi1g29970 B. distachyon v3.1
Defline:  (1 of 1) PTHR20922:SF15 - A_TM021B04.14 PROTEIN Genomic Order:  3795
Name:  ? Bradi1g29970 Secondary Identifier:  ? PAC:32801615
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g29970 0.5kb upstream 0.5kb upstream 2768 true Bd1: 25468171-25470938 Brachypodium distachyon
Bradi1g29970 0.5kb upstream 0.5kb upstream 500 false Bd1: 25470439-25470938 Brachypodium distachyon
Bradi1g29970 0.5kb downstream 0.5kb downstream 2768 true Bd1: 25467671-25470438 Brachypodium distachyon
Bradi1g29970 0.5kb downstream 0.5kb downstream 500 false Bd1: 25467671-25468170 Brachypodium distachyon
Bradi1g29970 1.0kb upstream 1.0kb upstream 3268 true Bd1: 25468171-25471438 Brachypodium distachyon
Bradi1g29970 1.0kb upstream 1.0kb upstream 1000 false Bd1: 25470439-25471438 Brachypodium distachyon
Bradi1g29970 1.0kb downstream 1.0kb downstream 3268 true Bd1: 25467171-25470438 Brachypodium distachyon
Bradi1g29970 1.0kb downstream 1.0kb downstream 1000 false Bd1: 25467171-25468170 Brachypodium distachyon
Bradi1g29970 2.0kb upstream 2.0kb upstream 4268 true Bd1: 25468171-25472438 Brachypodium distachyon
Bradi1g29970 2.0kb upstream 2.0kb upstream 2000 false Bd1: 25470439-25472438 Brachypodium distachyon
Bradi1g29970 2.0kb downstream 2.0kb downstream 4268 true Bd1: 25466171-25470438 Brachypodium distachyon
Bradi1g29970 2.0kb downstream 2.0kb downstream 2000 false Bd1: 25466171-25468170 Brachypodium distachyon
Bradi1g29970 5.0kb upstream 5.0kb upstream 7268 true Bd1: 25468171-25475438 Brachypodium distachyon
Bradi1g29970 5.0kb upstream 5.0kb upstream 5000 false Bd1: 25470439-25475438 Brachypodium distachyon
Bradi1g29970 5.0kb downstream 5.0kb downstream 7268 true Bd1: 25463171-25470438 Brachypodium distachyon
Bradi1g29970 5.0kb downstream 5.0kb downstream 5000 false Bd1: 25463171-25468170 Brachypodium distachyon
Bradi1g29970 10.0kb upstream 10.0kb upstream 12268 true Bd1: 25468171-25480438 Brachypodium distachyon
Bradi1g29970 10.0kb upstream 10.0kb upstream 10000 false Bd1: 25470439-25480438 Brachypodium distachyon
Bradi1g29970 10.0kb downstream 10.0kb downstream 12268 true Bd1: 25458171-25470438 Brachypodium distachyon
Bradi1g29970 10.0kb downstream 10.0kb downstream 10000 false Bd1: 25458171-25468170 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582138 5269 Grass View MSA
122042389 5273 Angiosperm View MSA
121347257 5274 Embryophyte View MSA
123425918 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.03     High  
cufflinks 35.555     High  
cufflinks 15.281     High  
cufflinks 35.188     High  
cufflinks 18.532     High  
cufflinks 33.272     High  
cufflinks 48.094     High High
cufflinks 17.221     High  
cufflinks 25.244     High  
cufflinks 33.295     High  
cufflinks 52.6     High High
cufflinks 15.126     High  
cufflinks 37.408     High  
cufflinks 51.851     High High
cufflinks 13.922     High  
cufflinks 24.711     High  
cufflinks 29.11     High  
cufflinks 5.403       Low
cufflinks 52.205     High High
cufflinks 47.269     High High
cufflinks 28.679     High  
cufflinks 14.7     High  
cufflinks 18.402     High  
cufflinks 27.055     High  
cufflinks 43.181     High  
cufflinks 19.768     High  
cufflinks 64.78     High High
cufflinks 26.283     High  
cufflinks 21.097     High  
cufflinks 9.4       Low

0 Strain