Gene : Bradi1g30130 B. distachyon v3.1
Defline:  (1 of 1) PTHR11528:SF45 - ENDOPLASMIN HOMOLOG Genomic Order:  3816
Name:  ? Bradi1g30130 Secondary Identifier:  ? PAC:32793974
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g30130 0.5kb upstream 0.5kb upstream 6232 true Bd1: 25571488-25577719 Brachypodium distachyon
Bradi1g30130 0.5kb upstream 0.5kb upstream 500 false Bd1: 25577220-25577719 Brachypodium distachyon
Bradi1g30130 0.5kb downstream 0.5kb downstream 6232 true Bd1: 25570988-25577219 Brachypodium distachyon
Bradi1g30130 0.5kb downstream 0.5kb downstream 500 false Bd1: 25570988-25571487 Brachypodium distachyon
Bradi1g30130 1.0kb upstream 1.0kb upstream 6732 true Bd1: 25571488-25578219 Brachypodium distachyon
Bradi1g30130 1.0kb upstream 1.0kb upstream 1000 false Bd1: 25577220-25578219 Brachypodium distachyon
Bradi1g30130 1.0kb downstream 1.0kb downstream 6732 true Bd1: 25570488-25577219 Brachypodium distachyon
Bradi1g30130 1.0kb downstream 1.0kb downstream 1000 false Bd1: 25570488-25571487 Brachypodium distachyon
Bradi1g30130 2.0kb upstream 2.0kb upstream 7732 true Bd1: 25571488-25579219 Brachypodium distachyon
Bradi1g30130 2.0kb upstream 2.0kb upstream 2000 false Bd1: 25577220-25579219 Brachypodium distachyon
Bradi1g30130 2.0kb downstream 2.0kb downstream 7732 true Bd1: 25569488-25577219 Brachypodium distachyon
Bradi1g30130 2.0kb downstream 2.0kb downstream 2000 false Bd1: 25569488-25571487 Brachypodium distachyon
Bradi1g30130 5.0kb upstream 5.0kb upstream 10732 true Bd1: 25571488-25582219 Brachypodium distachyon
Bradi1g30130 5.0kb upstream 5.0kb upstream 5000 false Bd1: 25577220-25582219 Brachypodium distachyon
Bradi1g30130 5.0kb downstream 5.0kb downstream 10732 true Bd1: 25566488-25577219 Brachypodium distachyon
Bradi1g30130 5.0kb downstream 5.0kb downstream 5000 false Bd1: 25566488-25571487 Brachypodium distachyon
Bradi1g30130 10.0kb upstream 10.0kb upstream 15732 true Bd1: 25571488-25587219 Brachypodium distachyon
Bradi1g30130 10.0kb upstream 10.0kb upstream 10000 false Bd1: 25577220-25587219 Brachypodium distachyon
Bradi1g30130 10.0kb downstream 10.0kb downstream 15732 true Bd1: 25561488-25577219 Brachypodium distachyon
Bradi1g30130 10.0kb downstream 10.0kb downstream 10000 false Bd1: 25561488-25571487 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586413 5269 Grass View MSA
122042425 5273 Angiosperm View MSA
121346567 5274 Embryophyte View MSA
123424830 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 79.994     High  
cufflinks 96.679     High  
cufflinks 82.062     High  
cufflinks 99.533     High  
cufflinks 69.671     High  
cufflinks 98.523     High  
cufflinks 75.925     High  
cufflinks 96.803     High  
cufflinks 114.551     High  
cufflinks 48.141     High  
cufflinks 48.471     High  
cufflinks 137.021     High  
cufflinks 30.852     High Low
cufflinks 37.134     High Low
cufflinks 149.561     High High
cufflinks 82.258     High  
cufflinks 104.191     High  
cufflinks 155.441     High High
cufflinks 69.124     High  
cufflinks 14.662     High Low
cufflinks 61.954     High  
cufflinks 82.191     High  
cufflinks 92.868     High  
cufflinks 104.871     High  
cufflinks 89.185     High  
cufflinks 53.159     High  
cufflinks 38.882     High Low
cufflinks 43.969     High  
cufflinks 58.445     High  
cufflinks 88.541     High  

0 Strain