Gene : Bradi1g30550 B. distachyon v3.1

Defline:  (1 of 12) K01507 - inorganic pyrophosphatase (ppa) Genomic Order:  3870
Name:  ? Bradi1g30550 Secondary Identifier:  ? PAC:32792250

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g30550 0.5kb upstream 0.5kb upstream 5123 true Bd1: 25907086-25912208 Brachypodium distachyon
Bradi1g30550 0.5kb upstream 0.5kb upstream 500 false Bd1: 25907086-25907585 Brachypodium distachyon
Bradi1g30550 0.5kb downstream 0.5kb downstream 5123 true Bd1: 25907586-25912708 Brachypodium distachyon
Bradi1g30550 0.5kb downstream 0.5kb downstream 500 false Bd1: 25912209-25912708 Brachypodium distachyon
Bradi1g30550 1.0kb upstream 1.0kb upstream 5623 true Bd1: 25906586-25912208 Brachypodium distachyon
Bradi1g30550 1.0kb upstream 1.0kb upstream 1000 false Bd1: 25906586-25907585 Brachypodium distachyon
Bradi1g30550 1.0kb downstream 1.0kb downstream 5623 true Bd1: 25907586-25913208 Brachypodium distachyon
Bradi1g30550 1.0kb downstream 1.0kb downstream 1000 false Bd1: 25912209-25913208 Brachypodium distachyon
Bradi1g30550 2.0kb upstream 2.0kb upstream 6623 true Bd1: 25905586-25912208 Brachypodium distachyon
Bradi1g30550 2.0kb upstream 2.0kb upstream 2000 false Bd1: 25905586-25907585 Brachypodium distachyon
Bradi1g30550 2.0kb downstream 2.0kb downstream 6623 true Bd1: 25907586-25914208 Brachypodium distachyon
Bradi1g30550 2.0kb downstream 2.0kb downstream 2000 false Bd1: 25912209-25914208 Brachypodium distachyon
Bradi1g30550 5.0kb upstream 5.0kb upstream 9623 true Bd1: 25902586-25912208 Brachypodium distachyon
Bradi1g30550 5.0kb upstream 5.0kb upstream 5000 false Bd1: 25902586-25907585 Brachypodium distachyon
Bradi1g30550 5.0kb downstream 5.0kb downstream 9623 true Bd1: 25907586-25917208 Brachypodium distachyon
Bradi1g30550 5.0kb downstream 5.0kb downstream 5000 false Bd1: 25912209-25917208 Brachypodium distachyon
Bradi1g30550 10.0kb upstream 10.0kb upstream 14623 true Bd1: 25897586-25912208 Brachypodium distachyon
Bradi1g30550 10.0kb upstream 10.0kb upstream 10000 false Bd1: 25897586-25907585 Brachypodium distachyon
Bradi1g30550 10.0kb downstream 10.0kb downstream 14623 true Bd1: 25907586-25922208 Brachypodium distachyon
Bradi1g30550 10.0kb downstream 10.0kb downstream 10000 false Bd1: 25912209-25922208 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124584491 5269 Grass View MSA
122044942 5273 Angiosperm View MSA
121349736 5274 Embryophyte View MSA
123426628 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 133.203     High  
cufflinks 214.371     High High
cufflinks 238.187     High High
cufflinks 162.647     High  
cufflinks 44.138     High Low
cufflinks 167.236     High  
cufflinks 187.678     High  
cufflinks 130.593     High  
cufflinks 133.868     High  
cufflinks 112.086     High  
cufflinks 172.78     High  
cufflinks 168.3     High  
cufflinks 176.648     High  
cufflinks 130.476     High  
cufflinks 102.364     High  
cufflinks 205.221     High High
cufflinks 99.64     High  
cufflinks 79.97     High  
cufflinks 128.009     High  
cufflinks 42.298     High Low
cufflinks 120.655     High  
cufflinks 174.264     High  
cufflinks 119.939     High  
cufflinks 132.26     High  
cufflinks 116.016     High  
cufflinks 207.355     High High
cufflinks 219.942     High High
cufflinks 197.091     High  
cufflinks 166.429     High  
cufflinks 182.845     High  

0 Strain