Gene : Bradi1g30600 B. distachyon v3.1
Defline:  (1 of 1) PTHR15414 - OS-9-RELATED Genomic Order:  3875
Name:  ? Bradi1g30600 Secondary Identifier:  ? PAC:32793685
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g30600 0.5kb upstream 0.5kb upstream 3269 true Bd1: 25944581-25947849 Brachypodium distachyon
Bradi1g30600 0.5kb upstream 0.5kb upstream 500 false Bd1: 25947350-25947849 Brachypodium distachyon
Bradi1g30600 0.5kb downstream 0.5kb downstream 3269 true Bd1: 25944081-25947349 Brachypodium distachyon
Bradi1g30600 0.5kb downstream 0.5kb downstream 500 false Bd1: 25944081-25944580 Brachypodium distachyon
Bradi1g30600 1.0kb upstream 1.0kb upstream 3769 true Bd1: 25944581-25948349 Brachypodium distachyon
Bradi1g30600 1.0kb upstream 1.0kb upstream 1000 false Bd1: 25947350-25948349 Brachypodium distachyon
Bradi1g30600 1.0kb downstream 1.0kb downstream 3769 true Bd1: 25943581-25947349 Brachypodium distachyon
Bradi1g30600 1.0kb downstream 1.0kb downstream 1000 false Bd1: 25943581-25944580 Brachypodium distachyon
Bradi1g30600 2.0kb upstream 2.0kb upstream 4769 true Bd1: 25944581-25949349 Brachypodium distachyon
Bradi1g30600 2.0kb upstream 2.0kb upstream 2000 false Bd1: 25947350-25949349 Brachypodium distachyon
Bradi1g30600 2.0kb downstream 2.0kb downstream 4769 true Bd1: 25942581-25947349 Brachypodium distachyon
Bradi1g30600 2.0kb downstream 2.0kb downstream 2000 false Bd1: 25942581-25944580 Brachypodium distachyon
Bradi1g30600 5.0kb upstream 5.0kb upstream 7769 true Bd1: 25944581-25952349 Brachypodium distachyon
Bradi1g30600 5.0kb upstream 5.0kb upstream 5000 false Bd1: 25947350-25952349 Brachypodium distachyon
Bradi1g30600 5.0kb downstream 5.0kb downstream 7769 true Bd1: 25939581-25947349 Brachypodium distachyon
Bradi1g30600 5.0kb downstream 5.0kb downstream 5000 false Bd1: 25939581-25944580 Brachypodium distachyon
Bradi1g30600 10.0kb upstream 10.0kb upstream 12769 true Bd1: 25944581-25957349 Brachypodium distachyon
Bradi1g30600 10.0kb upstream 10.0kb upstream 10000 false Bd1: 25947350-25957349 Brachypodium distachyon
Bradi1g30600 10.0kb downstream 10.0kb downstream 12769 true Bd1: 25934581-25947349 Brachypodium distachyon
Bradi1g30600 10.0kb downstream 10.0kb downstream 10000 false Bd1: 25934581-25944580 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026793 5273 Angiosperm View MSA
124579923 5269 Grass View MSA
121348244 5274 Embryophyte View MSA
123425730 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.907     High  
cufflinks 12.813     High  
cufflinks 13.844     High  
cufflinks 12.45     High  
cufflinks 12.22     High  
cufflinks 11.296     High  
cufflinks 12.039     High  
cufflinks 12.873     High  
cufflinks 11.246     High  
cufflinks 11.152     High  
cufflinks 11.09     High  
cufflinks 11.804     High  
cufflinks 9.732     High Low
cufflinks 9.627     High Low
cufflinks 13.473     High  
cufflinks 11.204     High  
cufflinks 14.269     High  
cufflinks 22.907     High High
cufflinks 15.591     High  
cufflinks 8.606       Low
cufflinks 18.647     High High
cufflinks 12.795     High  
cufflinks 13.496     High  
cufflinks 12.148     High  
cufflinks 12.136     High  
cufflinks 14.807     High  
cufflinks 14.098     High  
cufflinks 15.362     High  
cufflinks 13.743     High  
cufflinks 15.309     High  

0 Strain