Gene : Bradi1g31987 B. distachyon v3.1
Defline:  (1 of 5) PF00122//PF00403//PF12710 - E1-E2 ATPase (E1-E2_ATPase) // Heavy-metal-associated domain (HMA) // haloacid dehalogenase-like hydrolase (HAD) Genomic Order:  4056
Name:  ? Bradi1g31987 Secondary Identifier:  ? PAC:32801816
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g31987 0.5kb upstream 0.5kb upstream 7171 true Bd1: 27476378-27483548 Brachypodium distachyon
Bradi1g31987 0.5kb upstream 0.5kb upstream 500 false Bd1: 27483049-27483548 Brachypodium distachyon
Bradi1g31987 0.5kb downstream 0.5kb downstream 7171 true Bd1: 27475878-27483048 Brachypodium distachyon
Bradi1g31987 0.5kb downstream 0.5kb downstream 500 false Bd1: 27475878-27476377 Brachypodium distachyon
Bradi1g31987 1.0kb upstream 1.0kb upstream 7671 true Bd1: 27476378-27484048 Brachypodium distachyon
Bradi1g31987 1.0kb upstream 1.0kb upstream 1000 false Bd1: 27483049-27484048 Brachypodium distachyon
Bradi1g31987 1.0kb downstream 1.0kb downstream 7671 true Bd1: 27475378-27483048 Brachypodium distachyon
Bradi1g31987 1.0kb downstream 1.0kb downstream 1000 false Bd1: 27475378-27476377 Brachypodium distachyon
Bradi1g31987 2.0kb upstream 2.0kb upstream 8671 true Bd1: 27476378-27485048 Brachypodium distachyon
Bradi1g31987 2.0kb upstream 2.0kb upstream 2000 false Bd1: 27483049-27485048 Brachypodium distachyon
Bradi1g31987 2.0kb downstream 2.0kb downstream 8671 true Bd1: 27474378-27483048 Brachypodium distachyon
Bradi1g31987 2.0kb downstream 2.0kb downstream 2000 false Bd1: 27474378-27476377 Brachypodium distachyon
Bradi1g31987 5.0kb upstream 5.0kb upstream 11671 true Bd1: 27476378-27488048 Brachypodium distachyon
Bradi1g31987 5.0kb upstream 5.0kb upstream 5000 false Bd1: 27483049-27488048 Brachypodium distachyon
Bradi1g31987 5.0kb downstream 5.0kb downstream 11671 true Bd1: 27471378-27483048 Brachypodium distachyon
Bradi1g31987 5.0kb downstream 5.0kb downstream 5000 false Bd1: 27471378-27476377 Brachypodium distachyon
Bradi1g31987 10.0kb upstream 10.0kb upstream 16671 true Bd1: 27476378-27493048 Brachypodium distachyon
Bradi1g31987 10.0kb upstream 10.0kb upstream 10000 false Bd1: 27483049-27493048 Brachypodium distachyon
Bradi1g31987 10.0kb downstream 10.0kb downstream 16671 true Bd1: 27466378-27483048 Brachypodium distachyon
Bradi1g31987 10.0kb downstream 10.0kb downstream 10000 false Bd1: 27466378-27476377 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582889 5269 Grass View MSA
122045942 5273 Angiosperm View MSA
121346195 5274 Embryophyte View MSA
123426796 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.333        
cufflinks 5.519        
cufflinks 7.604        
cufflinks 4.865        
cufflinks 8.756        
cufflinks 5.0        
cufflinks 4.803        
cufflinks 6.37        
cufflinks 7.057        
cufflinks 4.485        
cufflinks 10.485     High  
cufflinks 7.727        
cufflinks 7.645     High  
cufflinks 7.122        
cufflinks 7.979        
cufflinks 5.8        
cufflinks 5.01        
cufflinks 33.44     High High
cufflinks 6.778        
cufflinks 6.333        
cufflinks 19.556     High High
cufflinks 6.826        
cufflinks 5.513        
cufflinks 5.994        
cufflinks 4.76        
cufflinks 5.792        
cufflinks 6.355        
cufflinks 5.61        
cufflinks 5.997        
cufflinks 11.561     High  

0 Strain