Gene : Bradi1g32219 B. distachyon v3.1
Defline:  (1 of 1) PTHR23089:SF3 - HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN 1 Genomic Order:  4082
Name:  ? Bradi1g32219 Secondary Identifier:  ? PAC:32791824
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g32219 0.5kb upstream 0.5kb upstream 3437 true Bd1: 27641165-27644601 Brachypodium distachyon
Bradi1g32219 0.5kb upstream 0.5kb upstream 500 false Bd1: 27641165-27641664 Brachypodium distachyon
Bradi1g32219 0.5kb downstream 0.5kb downstream 3437 true Bd1: 27641665-27645101 Brachypodium distachyon
Bradi1g32219 0.5kb downstream 0.5kb downstream 500 false Bd1: 27644602-27645101 Brachypodium distachyon
Bradi1g32219 1.0kb upstream 1.0kb upstream 3937 true Bd1: 27640665-27644601 Brachypodium distachyon
Bradi1g32219 1.0kb upstream 1.0kb upstream 1000 false Bd1: 27640665-27641664 Brachypodium distachyon
Bradi1g32219 1.0kb downstream 1.0kb downstream 3937 true Bd1: 27641665-27645601 Brachypodium distachyon
Bradi1g32219 1.0kb downstream 1.0kb downstream 1000 false Bd1: 27644602-27645601 Brachypodium distachyon
Bradi1g32219 2.0kb upstream 2.0kb upstream 4937 true Bd1: 27639665-27644601 Brachypodium distachyon
Bradi1g32219 2.0kb upstream 2.0kb upstream 2000 false Bd1: 27639665-27641664 Brachypodium distachyon
Bradi1g32219 2.0kb downstream 2.0kb downstream 4937 true Bd1: 27641665-27646601 Brachypodium distachyon
Bradi1g32219 2.0kb downstream 2.0kb downstream 2000 false Bd1: 27644602-27646601 Brachypodium distachyon
Bradi1g32219 5.0kb upstream 5.0kb upstream 7937 true Bd1: 27636665-27644601 Brachypodium distachyon
Bradi1g32219 5.0kb upstream 5.0kb upstream 5000 false Bd1: 27636665-27641664 Brachypodium distachyon
Bradi1g32219 5.0kb downstream 5.0kb downstream 7937 true Bd1: 27641665-27649601 Brachypodium distachyon
Bradi1g32219 5.0kb downstream 5.0kb downstream 5000 false Bd1: 27644602-27649601 Brachypodium distachyon
Bradi1g32219 10.0kb upstream 10.0kb upstream 12937 true Bd1: 27631665-27644601 Brachypodium distachyon
Bradi1g32219 10.0kb upstream 10.0kb upstream 10000 false Bd1: 27631665-27641664 Brachypodium distachyon
Bradi1g32219 10.0kb downstream 10.0kb downstream 12937 true Bd1: 27641665-27654601 Brachypodium distachyon
Bradi1g32219 10.0kb downstream 10.0kb downstream 10000 false Bd1: 27644602-27654601 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583814 5269 Grass View MSA
122042822 5273 Angiosperm View MSA
121347396 5274 Embryophyte View MSA
123425482 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.66        
cufflinks 8.866        
cufflinks 7.749        
cufflinks 10.492     High  
cufflinks 6.879        
cufflinks 7.579        
cufflinks 8.569        
cufflinks 7.336        
cufflinks 6.504        
cufflinks 11.84     High High
cufflinks 4.913       Low
cufflinks 5.072       Low
cufflinks 3.828       Low
cufflinks 5.576        
cufflinks 5.189        
cufflinks 7.376        
cufflinks 18.453     High High
cufflinks 5.935        
cufflinks 15.207     High High
cufflinks 2.893       Low
cufflinks 11.545     High High
cufflinks 6.174        
cufflinks 6.285        
cufflinks 7.195        
cufflinks 9.355        
cufflinks 10.518        
cufflinks 5.631        
cufflinks 9.497        
cufflinks 7.932        
cufflinks 8.047        

0 Strain