Gene : Bradi1g32180 B. distachyon v3.1
Defline:  (1 of 2) PTHR10894:SF0 - NUCLEOLAR PROTEIN 56 Genomic Order:  4078
Name:  ? Bradi1g32180 Secondary Identifier:  ? PAC:32792405
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g32180 0.5kb upstream 0.5kb upstream 4094 true Bd1: 27610754-27614847 Brachypodium distachyon
Bradi1g32180 0.5kb upstream 0.5kb upstream 500 false Bd1: 27614348-27614847 Brachypodium distachyon
Bradi1g32180 0.5kb downstream 0.5kb downstream 4094 true Bd1: 27610254-27614347 Brachypodium distachyon
Bradi1g32180 0.5kb downstream 0.5kb downstream 500 false Bd1: 27610254-27610753 Brachypodium distachyon
Bradi1g32180 1.0kb upstream 1.0kb upstream 4594 true Bd1: 27610754-27615347 Brachypodium distachyon
Bradi1g32180 1.0kb upstream 1.0kb upstream 1000 false Bd1: 27614348-27615347 Brachypodium distachyon
Bradi1g32180 1.0kb downstream 1.0kb downstream 4594 true Bd1: 27609754-27614347 Brachypodium distachyon
Bradi1g32180 1.0kb downstream 1.0kb downstream 1000 false Bd1: 27609754-27610753 Brachypodium distachyon
Bradi1g32180 2.0kb upstream 2.0kb upstream 5594 true Bd1: 27610754-27616347 Brachypodium distachyon
Bradi1g32180 2.0kb upstream 2.0kb upstream 2000 false Bd1: 27614348-27616347 Brachypodium distachyon
Bradi1g32180 2.0kb downstream 2.0kb downstream 5594 true Bd1: 27608754-27614347 Brachypodium distachyon
Bradi1g32180 2.0kb downstream 2.0kb downstream 2000 false Bd1: 27608754-27610753 Brachypodium distachyon
Bradi1g32180 5.0kb upstream 5.0kb upstream 8594 true Bd1: 27610754-27619347 Brachypodium distachyon
Bradi1g32180 5.0kb upstream 5.0kb upstream 5000 false Bd1: 27614348-27619347 Brachypodium distachyon
Bradi1g32180 5.0kb downstream 5.0kb downstream 8594 true Bd1: 27605754-27614347 Brachypodium distachyon
Bradi1g32180 5.0kb downstream 5.0kb downstream 5000 false Bd1: 27605754-27610753 Brachypodium distachyon
Bradi1g32180 10.0kb upstream 10.0kb upstream 13594 true Bd1: 27610754-27624347 Brachypodium distachyon
Bradi1g32180 10.0kb upstream 10.0kb upstream 10000 false Bd1: 27614348-27624347 Brachypodium distachyon
Bradi1g32180 10.0kb downstream 10.0kb downstream 13594 true Bd1: 27600754-27614347 Brachypodium distachyon
Bradi1g32180 10.0kb downstream 10.0kb downstream 10000 false Bd1: 27600754-27610753 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589600 5269 Grass View MSA
122042292 5273 Angiosperm View MSA
121349540 5274 Embryophyte View MSA
123424801 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.03        
cufflinks 9.95        
cufflinks 7.389        
cufflinks 8.836        
cufflinks 2.584        
cufflinks 8.643        
cufflinks 7.791        
cufflinks 5.658        
cufflinks 6.724        
cufflinks 4.09        
cufflinks 1.377       Low
cufflinks 6.366        
cufflinks 0.988       Low
cufflinks 0.969       Low
cufflinks 2.318        
cufflinks 8.418        
cufflinks 5.751        
cufflinks 18.97     High High
cufflinks 3.99        
cufflinks 1.313       Low
cufflinks 5.625        
cufflinks 5.483        
cufflinks 5.037        
cufflinks 5.266        
cufflinks 7.91        
cufflinks 4.98        
cufflinks 1.468       Low
cufflinks 3.786        
cufflinks 3.966        
cufflinks 8.553        

0 Strain