Gene : Bradi5g01760 B. distachyon v3.1
Defline:  actin-dependent ATPase activity (Blast2GO) Genomic Order:  172
Name:  ? Bradi5g01760 Secondary Identifier:  ? PAC:32810613
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g01760 0.5kb upstream 0.5kb upstream 4148 true Bd5: 1788252-1792399 Brachypodium distachyon
Bradi5g01760 0.5kb upstream 0.5kb upstream 500 false Bd5: 1788252-1788751 Brachypodium distachyon
Bradi5g01760 0.5kb downstream 0.5kb downstream 4148 true Bd5: 1788752-1792899 Brachypodium distachyon
Bradi5g01760 0.5kb downstream 0.5kb downstream 500 false Bd5: 1792400-1792899 Brachypodium distachyon
Bradi5g01760 1.0kb upstream 1.0kb upstream 4648 true Bd5: 1787752-1792399 Brachypodium distachyon
Bradi5g01760 1.0kb upstream 1.0kb upstream 1000 false Bd5: 1787752-1788751 Brachypodium distachyon
Bradi5g01760 1.0kb downstream 1.0kb downstream 4648 true Bd5: 1788752-1793399 Brachypodium distachyon
Bradi5g01760 1.0kb downstream 1.0kb downstream 1000 false Bd5: 1792400-1793399 Brachypodium distachyon
Bradi5g01760 2.0kb upstream 2.0kb upstream 5648 true Bd5: 1786752-1792399 Brachypodium distachyon
Bradi5g01760 2.0kb upstream 2.0kb upstream 2000 false Bd5: 1786752-1788751 Brachypodium distachyon
Bradi5g01760 2.0kb downstream 2.0kb downstream 5648 true Bd5: 1788752-1794399 Brachypodium distachyon
Bradi5g01760 2.0kb downstream 2.0kb downstream 2000 false Bd5: 1792400-1794399 Brachypodium distachyon
Bradi5g01760 5.0kb upstream 5.0kb upstream 8648 true Bd5: 1783752-1792399 Brachypodium distachyon
Bradi5g01760 5.0kb upstream 5.0kb upstream 5000 false Bd5: 1783752-1788751 Brachypodium distachyon
Bradi5g01760 5.0kb downstream 5.0kb downstream 8648 true Bd5: 1788752-1797399 Brachypodium distachyon
Bradi5g01760 5.0kb downstream 5.0kb downstream 5000 false Bd5: 1792400-1797399 Brachypodium distachyon
Bradi5g01760 10.0kb upstream 10.0kb upstream 13648 true Bd5: 1778752-1792399 Brachypodium distachyon
Bradi5g01760 10.0kb upstream 10.0kb upstream 10000 false Bd5: 1778752-1788751 Brachypodium distachyon
Bradi5g01760 10.0kb downstream 10.0kb downstream 13648 true Bd5: 1788752-1802399 Brachypodium distachyon
Bradi5g01760 10.0kb downstream 10.0kb downstream 10000 false Bd5: 1792400-1802399 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589321 5269 Grass View MSA
122047772 5273 Angiosperm View MSA
121310791 5274 Embryophyte View MSA
123348191 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.343       High
cufflinks 0.722        
cufflinks 0.765        
cufflinks 0.746        
cufflinks 2.274       High
cufflinks 0.757        
cufflinks 0.628        
cufflinks 0.829        
cufflinks 0.73        
cufflinks 0.753        
cufflinks 0.441       Low
cufflinks 0.651        
cufflinks 0.372       Low
cufflinks 0.543       Low
cufflinks 1.436       High
cufflinks 0.635        
cufflinks 1.112        
cufflinks 1.063        
cufflinks 0.691        
cufflinks 2.069       High
cufflinks 0.703        
cufflinks 0.908        
cufflinks 0.85        
cufflinks 0.672        
cufflinks 0.847        
cufflinks 0.843        
cufflinks 0.644        
cufflinks 0.842        
cufflinks 0.851        
cufflinks 0.845        

0 Strain