Gene : Bradi1g37297 B. distachyon v3.1
Defline:  (1 of 1) PTHR12411//PTHR12411:SF360 - CYSTEINE PROTEASE FAMILY C1-RELATED Genomic Order:  4759
Name:  ? Bradi1g37297 Secondary Identifier:  ? PAC:32803749
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g37297 0.5kb upstream 0.5kb upstream 1948 true Bd1: 33236485-33238432 Brachypodium distachyon
Bradi1g37297 0.5kb upstream 0.5kb upstream 500 false Bd1: 33236485-33236984 Brachypodium distachyon
Bradi1g37297 0.5kb downstream 0.5kb downstream 1948 true Bd1: 33236985-33238932 Brachypodium distachyon
Bradi1g37297 0.5kb downstream 0.5kb downstream 500 false Bd1: 33238433-33238932 Brachypodium distachyon
Bradi1g37297 1.0kb upstream 1.0kb upstream 2448 true Bd1: 33235985-33238432 Brachypodium distachyon
Bradi1g37297 1.0kb upstream 1.0kb upstream 1000 false Bd1: 33235985-33236984 Brachypodium distachyon
Bradi1g37297 1.0kb downstream 1.0kb downstream 2448 true Bd1: 33236985-33239432 Brachypodium distachyon
Bradi1g37297 1.0kb downstream 1.0kb downstream 1000 false Bd1: 33238433-33239432 Brachypodium distachyon
Bradi1g37297 2.0kb upstream 2.0kb upstream 3448 true Bd1: 33234985-33238432 Brachypodium distachyon
Bradi1g37297 2.0kb upstream 2.0kb upstream 2000 false Bd1: 33234985-33236984 Brachypodium distachyon
Bradi1g37297 2.0kb downstream 2.0kb downstream 3448 true Bd1: 33236985-33240432 Brachypodium distachyon
Bradi1g37297 2.0kb downstream 2.0kb downstream 2000 false Bd1: 33238433-33240432 Brachypodium distachyon
Bradi1g37297 5.0kb upstream 5.0kb upstream 6448 true Bd1: 33231985-33238432 Brachypodium distachyon
Bradi1g37297 5.0kb upstream 5.0kb upstream 5000 false Bd1: 33231985-33236984 Brachypodium distachyon
Bradi1g37297 5.0kb downstream 5.0kb downstream 6448 true Bd1: 33236985-33243432 Brachypodium distachyon
Bradi1g37297 5.0kb downstream 5.0kb downstream 5000 false Bd1: 33238433-33243432 Brachypodium distachyon
Bradi1g37297 10.0kb upstream 10.0kb upstream 11448 true Bd1: 33226985-33238432 Brachypodium distachyon
Bradi1g37297 10.0kb upstream 10.0kb upstream 10000 false Bd1: 33226985-33236984 Brachypodium distachyon
Bradi1g37297 10.0kb downstream 10.0kb downstream 11448 true Bd1: 33236985-33248432 Brachypodium distachyon
Bradi1g37297 10.0kb downstream 10.0kb downstream 10000 false Bd1: 33238433-33248432 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121995442 5273 Angiosperm View MSA
124588340 5269 Grass View MSA
121265634 5274 Embryophyte View MSA
123304011 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.063        
cufflinks 3.475        
cufflinks 1.797        
cufflinks 1.872        
cufflinks 1.093        
cufflinks 4.905        
cufflinks 5.351        
cufflinks 1.796        
cufflinks 2.316        
cufflinks 4.4        
cufflinks 7.442        
cufflinks 4.86        
cufflinks 2.664        
cufflinks 11.436     High High
cufflinks 3.956        
cufflinks 3.129        
cufflinks 8.63       High
cufflinks 0.015     Low Low
cufflinks 2.891        
cufflinks 1.656        
cufflinks 0.207       Low
cufflinks 3.446        
cufflinks 1.529        
cufflinks 4.618        
cufflinks 3.162        
cufflinks 3.888        
cufflinks 1.874        
cufflinks 2.352        
cufflinks 2.657        
cufflinks 0.21       Low

0 Strain