Gene : Bradi5g26450 B. distachyon v3.1
Defline:  (1 of 2) PTHR12385//PTHR12385:SF47 - CTL TRANSPORTER Genomic Order:  3151
Name:  ? Bradi5g26450 Secondary Identifier:  ? PAC:32808482
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g26450 0.5kb upstream 0.5kb upstream 5954 true Bd5: 27625362-27631315 Brachypodium distachyon
Bradi5g26450 0.5kb upstream 0.5kb upstream 500 false Bd5: 27630816-27631315 Brachypodium distachyon
Bradi5g26450 0.5kb downstream 0.5kb downstream 5954 true Bd5: 27624862-27630815 Brachypodium distachyon
Bradi5g26450 0.5kb downstream 0.5kb downstream 500 false Bd5: 27624862-27625361 Brachypodium distachyon
Bradi5g26450 1.0kb upstream 1.0kb upstream 6454 true Bd5: 27625362-27631815 Brachypodium distachyon
Bradi5g26450 1.0kb upstream 1.0kb upstream 1000 false Bd5: 27630816-27631815 Brachypodium distachyon
Bradi5g26450 1.0kb downstream 1.0kb downstream 6454 true Bd5: 27624362-27630815 Brachypodium distachyon
Bradi5g26450 1.0kb downstream 1.0kb downstream 1000 false Bd5: 27624362-27625361 Brachypodium distachyon
Bradi5g26450 2.0kb upstream 2.0kb upstream 7454 true Bd5: 27625362-27632815 Brachypodium distachyon
Bradi5g26450 2.0kb upstream 2.0kb upstream 2000 false Bd5: 27630816-27632815 Brachypodium distachyon
Bradi5g26450 2.0kb downstream 2.0kb downstream 7454 true Bd5: 27623362-27630815 Brachypodium distachyon
Bradi5g26450 2.0kb downstream 2.0kb downstream 2000 false Bd5: 27623362-27625361 Brachypodium distachyon
Bradi5g26450 5.0kb upstream 5.0kb upstream 10454 true Bd5: 27625362-27635815 Brachypodium distachyon
Bradi5g26450 5.0kb upstream 5.0kb upstream 5000 false Bd5: 27630816-27635815 Brachypodium distachyon
Bradi5g26450 5.0kb downstream 5.0kb downstream 10454 true Bd5: 27620362-27630815 Brachypodium distachyon
Bradi5g26450 5.0kb downstream 5.0kb downstream 5000 false Bd5: 27620362-27625361 Brachypodium distachyon
Bradi5g26450 10.0kb upstream 10.0kb upstream 15454 true Bd5: 27625362-27640815 Brachypodium distachyon
Bradi5g26450 10.0kb upstream 10.0kb upstream 10000 false Bd5: 27630816-27640815 Brachypodium distachyon
Bradi5g26450 10.0kb downstream 10.0kb downstream 15454 true Bd5: 27615362-27630815 Brachypodium distachyon
Bradi5g26450 10.0kb downstream 10.0kb downstream 10000 false Bd5: 27615362-27625361 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586558 5269 Grass View MSA
122045224 5273 Angiosperm View MSA
121347248 5274 Embryophyte View MSA
123428295 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.232        
cufflinks 3.348        
cufflinks 3.358        
cufflinks 2.826        
cufflinks 1.313        
cufflinks 2.991        
cufflinks 2.821        
cufflinks 2.361        
cufflinks 2.653        
cufflinks 1.677        
cufflinks 0.147       Low
cufflinks 2.501        
cufflinks 0.236       Low
cufflinks 0.12       Low
cufflinks 0.491        
cufflinks 3.089        
cufflinks 1.59        
cufflinks 5.769       High
cufflinks 2.969        
cufflinks 0.189       Low
cufflinks 2.462        
cufflinks 3.209        
cufflinks 2.412        
cufflinks 2.384        
cufflinks 2.3        
cufflinks 3.032        
cufflinks 0.099       Low
cufflinks 2.497        
cufflinks 2.726        
cufflinks 4.511       High

0 Strain