Gene : Bradi1g37250 B. distachyon v3.1
Defline:  (1 of 2) PTHR12170//PTHR12170:SF3 - MACROPHAGE ERYTHROBLAST ATTACHER-RELATED // REQUIRED FOR MEIOTIC NUCLEAR DIVISION 5 HOMOLOG B (S. CEREVISIAE) Genomic Order:  4755
Name:  ? Bradi1g37250 Secondary Identifier:  ? PAC:32794474
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g37250 0.5kb upstream 0.5kb upstream 3891 true Bd1: 33183445-33187335 Brachypodium distachyon
Bradi1g37250 0.5kb upstream 0.5kb upstream 500 false Bd1: 33183445-33183944 Brachypodium distachyon
Bradi1g37250 0.5kb downstream 0.5kb downstream 3891 true Bd1: 33183945-33187835 Brachypodium distachyon
Bradi1g37250 0.5kb downstream 0.5kb downstream 500 false Bd1: 33187336-33187835 Brachypodium distachyon
Bradi1g37250 1.0kb upstream 1.0kb upstream 4391 true Bd1: 33182945-33187335 Brachypodium distachyon
Bradi1g37250 1.0kb upstream 1.0kb upstream 1000 false Bd1: 33182945-33183944 Brachypodium distachyon
Bradi1g37250 1.0kb downstream 1.0kb downstream 4391 true Bd1: 33183945-33188335 Brachypodium distachyon
Bradi1g37250 1.0kb downstream 1.0kb downstream 1000 false Bd1: 33187336-33188335 Brachypodium distachyon
Bradi1g37250 2.0kb upstream 2.0kb upstream 5391 true Bd1: 33181945-33187335 Brachypodium distachyon
Bradi1g37250 2.0kb upstream 2.0kb upstream 2000 false Bd1: 33181945-33183944 Brachypodium distachyon
Bradi1g37250 2.0kb downstream 2.0kb downstream 5391 true Bd1: 33183945-33189335 Brachypodium distachyon
Bradi1g37250 2.0kb downstream 2.0kb downstream 2000 false Bd1: 33187336-33189335 Brachypodium distachyon
Bradi1g37250 5.0kb upstream 5.0kb upstream 8391 true Bd1: 33178945-33187335 Brachypodium distachyon
Bradi1g37250 5.0kb upstream 5.0kb upstream 5000 false Bd1: 33178945-33183944 Brachypodium distachyon
Bradi1g37250 5.0kb downstream 5.0kb downstream 8391 true Bd1: 33183945-33192335 Brachypodium distachyon
Bradi1g37250 5.0kb downstream 5.0kb downstream 5000 false Bd1: 33187336-33192335 Brachypodium distachyon
Bradi1g37250 10.0kb upstream 10.0kb upstream 13391 true Bd1: 33173945-33187335 Brachypodium distachyon
Bradi1g37250 10.0kb upstream 10.0kb upstream 10000 false Bd1: 33173945-33183944 Brachypodium distachyon
Bradi1g37250 10.0kb downstream 10.0kb downstream 13391 true Bd1: 33183945-33197335 Brachypodium distachyon
Bradi1g37250 10.0kb downstream 10.0kb downstream 10000 false Bd1: 33187336-33197335 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578535 5269 Grass View MSA
122047847 5273 Angiosperm View MSA
121347432 5274 Embryophyte View MSA
123424686 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.787        
cufflinks 9.55        
cufflinks 10.893     High  
cufflinks 8.212        
cufflinks 8.139        
cufflinks 9.492     High  
cufflinks 9.609     High  
cufflinks 8.379        
cufflinks 7.591        
cufflinks 6.661        
cufflinks 8.249        
cufflinks 10.254     High  
cufflinks 10.206     High  
cufflinks 6.611        
cufflinks 8.277        
cufflinks 9.756     High  
cufflinks 7.033        
cufflinks 15.535     High High
cufflinks 13.004     High High
cufflinks 5.421       Low
cufflinks 16.051     High High
cufflinks 10.07     High  
cufflinks 8.066        
cufflinks 8.585        
cufflinks 7.741        
cufflinks 10.343        
cufflinks 9.837     High  
cufflinks 9.597        
cufflinks 9.437        
cufflinks 16.016     High High

0 Strain